RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 GREB1Q4ZG55 1949 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 TRAV19A0A0A6YYK7 116 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 ACTN4O43707 911 aaKnown RBP21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 ATP2C2O75185 946 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 CST3P01034 146 aaPredicted RBP21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 PDGFRBP09619 1106 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 USP17L7P0C7H9 530 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 ANXA13P27216 316 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 GRIK1P39086 918 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 ID4P47928 161 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 PDE6CP51160 858 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 KRT85P78386 507 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 FOXK2Q01167 660 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 CYP27A1Q02318 531 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 FAM160A1Q05DH4 1040 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 RUNX3Q13761 415 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 PON2Q15165 354 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 PDGFRLQ15198 375 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 WDR72Q3MJ13 1102 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 TXNDC11Q6PKC3 985 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 STKLD1Q8NE28 680 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 EXOC4Q96A65 974 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 TRPC7Q9HCX4 862 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 CRTAC1Q9NQ79 661 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 CCL26Q9Y258 94 aa21.75■■□□□ 1.07
PDLIM4-206ENST00000474421 ANAPC1Q9H1A4 1944 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 GPR179Q6PRD1 2367 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 TRIM66O15016 1216 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 PHACTR2O75167 634 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 TADA3O75528 432 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 PAPSS2O95340 614 aaPredicted RBP21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 PFKLP17858 780 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 BDNFP23560 247 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 CCDC142Q17RM4 750 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 GRAMD1CQ8IYS0 662 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 KIAA2013Q8IYS2 634 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 GPR161Q8N6U8 529 aaKnown RBP21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 OR6B3Q8NGW1 331 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 TMEM174Q8WUU8 243 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 SPATA32Q96LK8 384 aa21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 RBM12Q9NTZ6 932 aaKnown RBP21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 SMG5Q9UPR3 1016 aaKnown RBP21.74■■□□□ 1.07
PDLIM4-206ENST00000474421 KLRC4O43908 158 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 CKMP06732 381 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 PFKFB1P16118 471 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 SATB1Q01826 763 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 CCINQ13939 588 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 GAS6Q14393 721 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 SLC9A9Q8IVB4 645 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 PCED1BQ96HM7 432 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 MRPL45Q9BRJ2 306 aaKnown RBP21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 EBF3Q9H4W6 596 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 RAB23Q9ULC3 237 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 ATP6V1DQ9Y5K8 247 aa21.73■■□□□ 1.07
PDLIM4-206ENST00000474421 A0A1B0GVL5 298 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 PPP3CCP48454 512 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 MYL6P60660 151 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 GRSF1Q12849 480 aaKnown RBP eCLIP21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 STK4Q13043 487 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 KCNB1Q14721 858 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 MTF1Q14872 753 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 KMT5BQ4FZB7 885 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 MDH1BQ5I0G3 518 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 DENND5BQ6ZUT9 1274 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 ZNF516Q92618 1163 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 CCDC47Q96A33 483 aaKnown RBP21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 GZF1Q9H116 711 aaPredicted RBP21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 VRTNQ9H8Y1 702 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 HPS4Q9NQG7 708 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 NXF1Q9UBU9 619 aaKnown RBP21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 DMXL1Q9Y485 3027 aa21.72■■□□□ 1.07
PDLIM4-206ENST00000474421 DCHS1Q96JQ0 3298 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 KIF20AO95235 890 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 PTPN1P18031 435 aaKnown RBP21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 CLDN10P78369 228 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 BIRC3Q13489 604 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 ERMP1Q7Z2K6 904 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 CPA6Q8N4T0 437 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 KIAA0895Q8NCT3 520 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 PARD3BQ8TEW8 1205 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 C8orf48Q96LL4 319 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 ELOVL4Q9GZR5 314 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 XYLT2Q9H1B5 865 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 DMAC2Q9NW81 257 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 TRPM5Q9NZQ8 1165 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 HPSEQ9Y251 543 aa21.71■■□□□ 1.07
PDLIM4-206ENST00000474421 A8MXQ7 604 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 PDXKO00764 312 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 TRDMT1O14717 391 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 HDCP19113 662 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 CNR2P34972 360 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 SYKP43405 635 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 NOP14P78316 857 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 ZNF77Q15935 545 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 ZNF699Q32M78 642 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 TMEM196Q5HYL7 178 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 WDR44Q5JSH3 913 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 TRIM68Q6AZZ1 485 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 Q6ZS52 159 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 DCLK2Q8N568 766 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms