RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CPA6Q8N4T0 437 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 STKLD1Q8NE28 680 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 DEFB124Q8NES8 71 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 MDGA1Q8NFP4 955 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 TSTD1Q8NFU3 115 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 FBXO18Q8NFZ0 1043 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 SPPL2BQ8TCT7 592 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 C2orf15Q8WU43 125 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 OSCP1Q8WVF1 389 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 CD101Q93033 1021 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 BICD1Q96G01 975 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 C8orf76Q96K31 380 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 CNOT6LQ96LI5 555 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 RAB34Q9BZG1 259 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 TPSD1Q9BZJ3 242 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 ZMYND15Q9H091 742 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 ECT2Q9H8V3 914 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 RPF1Q9H9Y2 349 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 ABI2Q9NYB9 513 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 EVLQ9UI08 416 aaPredicted RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 CPSF3Q9UKF6 684 aaKnown RBP5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 DSEQ9UL01 958 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 INVSQ9Y283 1065 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 NEUROG3Q9Y4Z2 214 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 DENND4CQ5VZ89 1909 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 OBSL1O75147 1896 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 ANK1P16157 1881 aa5.54□□□□□ -1.52
SNRNP40-204ENST00000474025 SCN1AP35498 2009 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 A0A0B4J269 797 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 NPHP3-ACAD11A0A0J9YXS1 232 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 ANTXRLA6NF34 631 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 H0YCG3 227 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 CYB561D2O14569 222 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 CSH1P0DML2 217 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 CSH2P0DML3 217 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 HNRNPLP14866 589 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 PRPHP41219 470 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 IFNAR2P48551 515 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 GPR15P49685 360 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 LIG4P49917 911 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 FAM160A1Q05DH4 1040 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 TMEM132DQ14C87 1099 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 GAB4Q2WGN9 574 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 UAP1L1Q3KQV9 507 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 KMT5BQ4FZB7 885 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 ARSHQ5FYA8 562 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 HYIQ5T013 277 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 SDHAF4Q5VUM1 108 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC39A4Q6P5W5 647 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 METTL23Q86XA0 190 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 SYT2Q8N9I0 419 aaPredicted RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 OLIG1Q8TAK6 271 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 LEO1Q8WVC0 666 aaPredicted RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 MRPS31Q92665 395 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 ATP2A3Q93084 1043 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 EXOC4Q96A65 974 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 MYRFLQ96LU7 910 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 PNMA5Q96PV4 448 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC22A12Q96S37 553 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 PYM1Q9BRP8 204 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 MSTO1Q9BUK6 570 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 CCSER1Q9C0I3 900 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 TMEM206Q9H813 350 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 TMLHEQ9NVH6 421 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 DUS2Q9NX74 493 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 KCND2Q9NZV8 630 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 LARSQ9P2J5 1176 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 KCNG1Q9UIX4 513 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 KLK13Q9UKR3 277 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 MMP17Q9ULZ9 603 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 NOL7Q9UMY1 257 aaKnown RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 MAGED2Q9UNF1 606 aaPredicted RBP5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 DERAQ9Y315 318 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 C2CD2Q9Y426 696 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 PCDHB6Q9Y5E3 794 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 PCDHB5Q9Y5E4 795 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 WNT6Q9Y6F9 365 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 THADAQ6YHU6 1953 aa5.53□□□□□ -1.52
SNRNP40-204ENST00000474025 BOD1L1Q8NFC6 3051 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TRAV19A0A0A6YYK7 116 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SPAARA0A1B0GVQ0 90 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 UPK3BL1B0FP48 263 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 UPK3BL2E5RIL1 263 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 H0Y626 953 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 K7EQS6 105 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 LAD1O00515 517 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TNFRSF10BO14763 440 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PRPF40AO75400 957 aaKnown RBP5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 NOL4O94818 638 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TRIM16O95361 564 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CAPNS1P04632 268 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 CKMP06732 381 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 USP17L7P0C7H9 530 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 PLA2G4BP0C869 781 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 TCF3P15923 654 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 ENGP17813 658 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 SCP2P22307 547 aa5.52□□□□□ -1.53
SNRNP40-204ENST00000474025 OPRD1P41143 372 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms