RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CKMP06732 381 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 PTPN1P18031 435 aaKnown RBP12.28□□□□□ -0.44
CPNE1-222ENST00000473373 CD72P21854 359 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 DDX6P26196 483 aaKnown RBP eCLIP12.28□□□□□ -0.444e-9■■□□□ 11.8
CPNE1-222ENST00000473373 PPP1R2P41236 205 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 ID4P47928 161 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 CDH8P55286 799 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 NLRP12P59046 1061 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 CFAP221Q4G0U5 840 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 VSTM1Q6UX27 236 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 ZNF852Q6ZMS4 543 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 SV2AQ7L0J3 742 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 MFSD6LQ8IWD5 586 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 B3GALNT2Q8NCR0 500 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 MYCBPAPQ8TBZ2 947 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 TAF4BQ92750 862 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 LRRC3Q9BY71 257 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 BCO2Q9BYV7 579 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 ELOVL4Q9GZR5 314 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 CRTAC1Q9NQ79 661 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 MYO15AQ9UKN7 3530 aa12.28□□□□□ -0.44
CPNE1-222ENST00000473373 PATJQ8NI35 1801 aa12.27□□□□□ -0.44
CPNE1-222ENST00000473373 COL4A3Q01955 1670 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 TRAV19A0A0A6YYK7 116 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 BIN1O00499 593 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 GADD45BO75293 160 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-222ENST00000473373 FAM163BP0C2L3 166 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 NPR3P17342 541 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 FCARP24071 287 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 MAGEA11P43364 429 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 MXI1P50539 228 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.45
CPNE1-222ENST00000473373 FKBP3Q00688 224 aaKnown RBP12.27□□□□□ -0.45
CPNE1-222ENST00000473373 NFIL3Q16649 462 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 ZACNQ401N2 412 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 ARHGAP29Q52LW3 1261 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 WDR44Q5JSH3 913 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 SPOPLQ6IQ16 392 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 PHLDB3Q6NSJ2 640 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 FAM171BQ6P995 826 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 DENND5BQ6ZUT9 1274 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 ACOT1Q86TX2 421 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 CMTM8Q8IZV2 173 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 CELF5Q8N6W0 485 aaKnown RBP12.27□□□□□ -0.45
CPNE1-222ENST00000473373 DTWD2Q8NBA8 298 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 PJA1Q8NG27 643 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 TTC8Q8TAM2 541 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 BPIFB1Q8TDL5 484 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 SMG9Q9H0W8 520 aaKnown RBP12.27□□□□□ -0.45
CPNE1-222ENST00000473373 TMEM8AQ9HCN3 771 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 CACNA1HO95180 2353 aa12.27□□□□□ -0.45
CPNE1-222ENST00000473373 BICDL2A1A5D9 508 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 TRIM49BA6NDI0 452 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 FAM170BA6NMN3 283 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 F8VP50 259 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 CLDN5O00501 218 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 MAN2B1O00754 1011 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 NRG2O14511 850 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-222ENST00000473373 VNN1O95497 513 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 CD58P19256 250 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 PDE6CP51160 858 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 STARD6P59095 220 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 LRRC63Q05C16 580 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 ORC1Q13415 861 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 KRT39Q6A163 491 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 TXNDC8Q6A555 127 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 CREBRFQ8IUR6 639 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 CCDC105Q8IYK2 499 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 ZFYVE19Q96K21 471 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 SLITRK1Q96PX8 696 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 NELL2Q99435 816 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 MKNK1Q9BUB5 465 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 XYLT2Q9H1B5 865 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 TRPV4Q9HBA0 871 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 SPATA6Q9NWH7 488 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-222ENST00000473373 TRPM5Q9NZQ8 1165 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 MAN1B1Q9UKM7 699 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 CTNND2Q9UQB3 1225 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 PIAS3Q9Y6X2 628 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
CPNE1-222ENST00000473373 CHADO15335 359 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 AP1G2O75843 785 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 NOL4O94818 638 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 ASS1P00966 412 aaKnown RBP12.25□□□□□ -0.45
CPNE1-222ENST00000473373 F11P03951 625 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 USP17L7P0C7H9 530 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 HMGA1P17096 107 aaKnown RBP12.25□□□□□ -0.45
CPNE1-222ENST00000473373 ADORA2BP29275 332 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 GTF2H1P32780 548 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 NDST1P52848 882 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 UBE2HP62256 183 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 CLDN10P78369 228 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 PPP3CAQ08209 521 aa12.25□□□□□ -0.45
CPNE1-222ENST00000473373 ANGPT1Q15389 498 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms