RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 FAM3CQ92520 227 aa20.72■□□□□ 0.91
COMMD1-208ENST00000472729 MSANTD3Q96H12 275 aa20.72■□□□□ 0.91
COMMD1-208ENST00000472729 SPATA17Q96L03 361 aa20.72■□□□□ 0.91
COMMD1-208ENST00000472729 DDX23Q9BUQ8 820 aaKnown RBP20.72■□□□□ 0.91
COMMD1-208ENST00000472729 GZF1Q9H116 711 aaPredicted RBP20.72■□□□□ 0.91
COMMD1-208ENST00000472729 CIZ1Q9ULV3 898 aaPredicted RBP20.72■□□□□ 0.91
COMMD1-208ENST00000472729 NDRG2Q9UN36 371 aaKnown RBP20.72■□□□□ 0.91
COMMD1-208ENST00000472729 TRAV19A0A0A6YYK7 116 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 LAMTOR5O43504 91 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 F11P03951 625 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 GCLMP48507 274 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 CCDC142Q17RM4 750 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 TXNDC8Q6A555 127 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 C1orf210Q8IVY1 113 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 STKLD1Q8NE28 680 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 MYRFLQ96LU7 910 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 SMG9Q9H0W8 520 aaKnown RBP20.71■□□□□ 0.91
COMMD1-208ENST00000472729 SMYD3Q9H7B4 428 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 C8orf33Q9H7E9 229 aaPredicted RBP20.71■□□□□ 0.91
COMMD1-208ENST00000472729 KIF9Q9HAQ2 790 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 TDP1Q9NUW8 608 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 TRPM5Q9NZQ8 1165 aa20.71■□□□□ 0.91
COMMD1-208ENST00000472729 CKMP06732 381 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 USP17L7P0C7H9 530 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 CDH8P55286 799 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 ENPEPQ07075 957 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 ENGASEQ8NFI3 743 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 C8orf48Q96LL4 319 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 MKNK1Q9BUB5 465 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 DPEP3Q9H4B8 488 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 PCDHA5Q9Y5H7 936 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 SCN1AP35498 2009 aa20.7■□□□□ 0.9
COMMD1-208ENST00000472729 F8VP50 259 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 PSMA7O14818 248 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 VNN1O95497 513 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 PRAMEF12O95522 483 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 ABL1P00519 1130 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 HLA-DRAP01903 254 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 TRIM49P0CI25 452 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 TRIM49CP0CI26 452 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 GTF2H1P32780 548 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 PPP1R2P41236 205 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 PRCPP42785 496 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 RAP1GAPP47736 663 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 PPP3CCP48454 512 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 AMPD2Q01433 879 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 ZC3H14Q6PJT7 736 aaKnown RBP20.69■□□□□ 0.9
COMMD1-208ENST00000472729 SLITRK1Q96PX8 696 aa20.69■□□□□ 0.9
COMMD1-208ENST00000472729 MTF2Q9Y483 593 aaPredicted RBP20.69■□□□□ 0.9
COMMD1-208ENST00000472729 DOCK8Q8NF50 2099 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 LRRN2O75325 713 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 CCNE1P24864 410 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 TARSP26639 723 aaKnown RBP20.68■□□□□ 0.9
COMMD1-208ENST00000472729 ANP32AP39687 249 aaKnown RBP20.68■□□□□ 0.9
COMMD1-208ENST00000472729 MLLT6P55198 1093 aaPredicted RBP20.68■□□□□ 0.9
COMMD1-208ENST00000472729 FKBP3Q00688 224 aaKnown RBP20.68■□□□□ 0.9
COMMD1-208ENST00000472729 IFRD2Q12894 506 aaPredicted RBP20.68■□□□□ 0.9
COMMD1-208ENST00000472729 PPP2R5DQ14738 602 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 WDR44Q5JSH3 913 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 TCERG1LQ5VWI1 586 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 KRT39Q6A163 491 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 TTC8Q8TAM2 541 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 EXOC4Q96A65 974 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 RSPRY1Q96DX4 576 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 EEF2KMTQ96G04 330 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 ZFYVE19Q96K21 471 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 TMEM8AQ9HCN3 771 aa20.68■□□□□ 0.9
COMMD1-208ENST00000472729 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■■■■ 149.1
COMMD1-208ENST00000472729 ASS1P00966 412 aaKnown RBP20.67■□□□□ 0.9
COMMD1-208ENST00000472729 HDCP19113 662 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 RPS9P46781 194 aaKnown RBP20.67■□□□□ 0.9
COMMD1-208ENST00000472729 LRRC63Q05C16 580 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 LRRC32Q14392 662 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 ITPRIPL2Q3MIP1 535 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 TMEM150AQ86TG1 271 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 ACOT1Q86TX2 421 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 UNC93AQ86WB7 457 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 RALGPS2Q86X27 583 aaPredicted RBP20.67■□□□□ 0.9
COMMD1-208ENST00000472729 ERCC4Q92889 916 aaPredicted RBP20.67■□□□□ 0.9
COMMD1-208ENST00000472729 USP13Q92995 863 aaPredicted RBP20.67■□□□□ 0.9
COMMD1-208ENST00000472729 NKD2Q969F2 451 aaPredicted RBP20.67■□□□□ 0.9
COMMD1-208ENST00000472729 PHOX2BQ99453 314 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 B3GNT5Q9BYG0 378 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 ZNF518BQ9C0D4 1074 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 CYP3A43Q9HB55 503 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 GKN1Q9NS71 199 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 DLGAP2Q9P1A6 1054 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 ZNF318Q5VUA4 2279 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 ANK1P16157 1881 aa20.67■□□□□ 0.9
COMMD1-208ENST00000472729 RTN3O95197 1032 aaPredicted RBP20.66■□□□□ 0.9
COMMD1-208ENST00000472729 MXI1P50539 228 aa20.66■□□□□ 0.9
COMMD1-208ENST00000472729 NDST1P52848 882 aa20.66■□□□□ 0.9
COMMD1-208ENST00000472729 NOP14P78316 857 aaKnown RBP20.66■□□□□ 0.9
COMMD1-208ENST00000472729 ZCWPW2Q504Y3 356 aa20.66■□□□□ 0.9
COMMD1-208ENST00000472729 COBLL1Q53SF7 1204 aa20.66■□□□□ 0.9
COMMD1-208ENST00000472729 DCAF17Q5H9S7 520 aaPredicted RBP20.66■□□□□ 0.9
COMMD1-208ENST00000472729 ISM2Q6H9L7 571 aa20.66■□□□□ 0.9
COMMD1-208ENST00000472729 SPOPLQ6IQ16 392 aa20.66■□□□□ 0.9
COMMD1-208ENST00000472729 FRMD5Q7Z6J6 570 aa20.66■□□□□ 0.9
COMMD1-208ENST00000472729 ELOA2Q8IYF1 753 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms