RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 SARGQ9BW04 601 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 TMEM168Q9H0V1 697 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 INCENPQ9NQS7 918 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 PDGFCQ9NRA1 345 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 FBXO2Q9UK22 296 aaPredicted RBP7.8□□□□□ -1.16
SCAF4-205ENST00000472318 SPEF1Q9Y4P9 236 aa7.8□□□□□ -1.16
SCAF4-205ENST00000472318 TET1Q8NFU7 2136 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 SLC27A2O14975 620 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 PRODHO43272 600 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 LAMTOR5O43504 91 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 NBNO60934 754 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 RNASEH2AO75792 299 aaKnown RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 LMNAP02545 664 aaKnown RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 CXCL10P02778 98 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 INSRRP14616 1297 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 HALP42357 657 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 HTRA4P83105 476 aaPredicted RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 ADAM15Q13444 863 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 SURF1Q15526 300 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 FAM47CQ5HY64 1035 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 RNF219Q5W0B1 726 aaPredicted RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 ZKSCAN2Q63HK3 967 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 NAA16Q6N069 864 aaPredicted RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 CXorf57Q6NSI4 855 aaKnown RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 DTX3Q8N9I9 347 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 SNRNP27Q8WVK2 155 aaKnown RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 JPH3Q8WXH2 748 aaPredicted RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 GPR20Q99678 358 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 CROTQ9UKG9 612 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 PA2G4Q9UQ80 394 aaKnown RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 INSL6Q9Y581 213 aa7.79□□□□□ -1.16
SCAF4-205ENST00000472318 ASH1LQ9NR48 2969 aaKnown RBP7.79□□□□□ -1.16
SCAF4-205ENST00000472318 MAST4O15021 2626 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 ABHD14A-ACY1A0A1B0GW23 586 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 VSTM5A8MXK1 200 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 MPHOSPH10O00566 681 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 WDR46O15213 610 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 GRM6O15303 877 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 PRPF3O43395 683 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 CSPG5O95196 566 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 ZSCAN20P17040 1043 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 IL15P40933 162 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 MCAMP43121 646 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 ATXN1P54253 815 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 GPR85P60893 370 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 CNTN2Q02246 1040 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 BFSP2Q13515 415 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 CPZQ66K79 652 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 SNRNP48Q6IEG0 339 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 KCNT2Q6UVM3 1135 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 NSMFQ6X4W1 530 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 LRRC47Q8N1G4 583 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 SMRP1Q8NCR6 262 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 PPHLN1Q8NEY8 458 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 CLEC4DQ8WXI8 215 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 LOXL4Q96JB6 756 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 CTAGE1Q96RT6 745 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 STRBPQ96SI9 672 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 ELAC2Q9BQ52 826 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 SPATA9Q9BWV2 254 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 PHF7Q9BWX1 381 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 USP44Q9H0E7 712 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 SMOC2Q9H3U7 446 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 VCPKMTQ9H867 229 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 DLL4Q9NR61 685 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 NOL7Q9UMY1 257 aaKnown RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 TMX2Q9Y320 296 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 USP15Q9Y4E8 981 aaPredicted RBP7.78□□□□□ -1.16
SCAF4-205ENST00000472318 SIP14410 1827 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 FANCIQ9NVI1 1328 aa7.78□□□□□ -1.16
SCAF4-205ENST00000472318 GCN1Q92616 2671 aaKnown RBP7.77□□□□□ -1.16
SCAF4-205ENST00000472318 MYO7AQ13402 2215 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 TRAV20A0A0B4J274 112 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 ANO9A1A5B4 782 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 C1QTNF3-AMACRE9PGA6 284 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 NDUFV1P49821 464 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 GEMIN4P57678 1058 aaKnown RBP7.77□□□□□ -1.17
SCAF4-205ENST00000472318 EXOSC9Q06265 439 aaKnown RBP7.77□□□□□ -1.17
SCAF4-205ENST00000472318 GABPAQ06546 454 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 MVPQ14764 893 aaKnown RBP7.77□□□□□ -1.17
SCAF4-205ENST00000472318 YOD1Q5VVQ6 348 aaPredicted RBP7.77□□□□□ -1.17
SCAF4-205ENST00000472318 VASNQ6EMK4 673 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 TAPT1Q6NXT6 567 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 CNNM4Q6P4Q7 775 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 STRA8Q7Z7C7 330 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 CREBRFQ8IUR6 639 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 KLHL36Q8N4N3 616 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 FAM133AQ8N9E0 248 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 C8orf49Q96NF6 230 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 TEX13BQ9BXU2 312 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 CCDC8Q9H0W5 538 aaPredicted RBP7.77□□□□□ -1.17
SCAF4-205ENST00000472318 IFT122Q9HBG6 1241 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 PPP4R1LQ9P1A2 415 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 FTSJ1Q9UET6 329 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 POLG2Q9UHN1 485 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 FRMD4BQ9Y2L6 1034 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 R4GN57 208 aa7.77□□□□□ -1.17
SCAF4-205ENST00000472318 ZNFX1Q9P2E3 1918 aaKnown RBP7.76□□□□□ -1.17
SCAF4-205ENST00000472318 WDFY3Q8IZQ1 3526 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms