RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 TMEM63CQ9P1W3 806 aa13.21□□□□□ -0.3
LINC00888-202ENST00000471496 LIMD1Q9UGP4 676 aa13.21□□□□□ -0.3
LINC00888-202ENST00000471496 MYH10P35580 1976 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 PATJQ8NI35 1801 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 A8MXQ7 604 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 ASGR2P07307 311 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 CEBPBP17676 345 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 PTPN1P18031 435 aaKnown RBP13.2□□□□□ -0.3
LINC00888-202ENST00000471496 ERCC5P28715 1186 aaPredicted RBP13.2□□□□□ -0.3
LINC00888-202ENST00000471496 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
LINC00888-202ENST00000471496 EPHB3P54753 998 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 INCA1Q0VD86 236 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 PLD1Q13393 1074 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 B3GALNT2Q8NCR0 500 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 STKLD1Q8NE28 680 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 GPR152Q8TDT2 470 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 ING5Q8WYH8 240 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 ACSF2Q96CM8 615 aaPredicted RBP13.2□□□□□ -0.3
LINC00888-202ENST00000471496 FUBP3Q96I24 572 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC00888-202ENST00000471496 TWNKQ96RR1 684 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 ARID3AQ99856 593 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 ASB3Q9Y575 518 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 NUP210Q8TEM1 1887 aaPredicted RBP13.2□□□□□ -0.3
LINC00888-202ENST00000471496 TECTAO75443 2155 aa13.2□□□□□ -0.3
LINC00888-202ENST00000471496 ANHXE9PGG2 379 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 MICAL2O94851 1124 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 GNA14O95837 355 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 P4HA1P13674 534 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 HMGA1P17096 107 aaKnown RBP13.19□□□□□ -0.3
LINC00888-202ENST00000471496 MAGEA11P43364 429 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 NDST1P52848 882 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 CACNA2D1P54289 1103 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 DDR2Q16832 855 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 SDHAF4Q5VUM1 108 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 PAQR9Q6ZVX9 377 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 GAREM2Q75VX8 874 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 SPATA2LQ8IUW3 424 aaPredicted RBP13.19□□□□□ -0.3
LINC00888-202ENST00000471496 CRYBG2Q8N1P7 616 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 GIPC2Q8TF65 315 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 FAXDC2Q96IV6 333 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 B3GNT5Q9BYG0 378 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 IMPG2Q9BZV3 1241 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 CYP3A43Q9HB55 503 aa13.19□□□□□ -0.3
LINC00888-202ENST00000471496 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
LINC00888-202ENST00000471496 CLDN5O00501 218 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 DCXO43602 365 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 MYL4P12829 197 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 GJA1P17302 382 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 BDNFP23560 247 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 KCNH2Q12809 1159 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 ORC1Q13415 861 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 MTMR3Q13615 1198 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 HTR4Q13639 388 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 MAPRE1Q15691 268 aaKnown RBP13.18□□□□□ -0.3
LINC00888-202ENST00000471496 CCDC183Q5T5S1 534 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 C4orf50Q6ZRC1 276 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 PDZD4Q76G19 769 aaPredicted RBP13.18□□□□□ -0.3
LINC00888-202ENST00000471496 TMEM150AQ86TG1 271 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 ACOT1Q86TX2 421 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 UNC93AQ86WB7 457 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 ELMOD1Q8N336 334 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 LEMD2Q8NC56 503 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 ST13P5Q8NFI4 369 aaPredicted RBP13.18□□□□□ -0.3
LINC00888-202ENST00000471496 SHKBP1Q8TBC3 707 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 RSAD2Q8WXG1 361 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
LINC00888-202ENST00000471496 KCNK12Q9HB15 430 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 C11orf16Q9NQ32 467 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
LINC00888-202ENST00000471496 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
LINC00888-202ENST00000471496 ZFP37Q9Y6Q3 630 aaPredicted RBP13.18□□□□□ -0.3
LINC00888-202ENST00000471496 ZNF197O14709 1029 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 CILPO75339 1184 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
LINC00888-202ENST00000471496 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 CT47A1Q5JQC4 288 aaPredicted RBP13.17□□□□□ -0.3
LINC00888-202ENST00000471496 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 PARM1Q6UWI2 310 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 C11orf57Q6ZUT1 292 aaPredicted RBP13.17□□□□□ -0.3
LINC00888-202ENST00000471496 FUKQ8N0W3 1084 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 UBR7Q8N806 425 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 FGF14Q92915 247 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 MCRS1Q96EZ8 462 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 RPP25Q9BUL9 199 aaKnown RBP13.17□□□□□ -0.3
LINC00888-202ENST00000471496 ZNF518BQ9C0D4 1074 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 ELOVL4Q9GZR5 314 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 THAP9Q9H5L6 903 aa13.17□□□□□ -0.3
LINC00888-202ENST00000471496 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC00888-202ENST00000471496 A0A1W2PRU2 124 aa13.16□□□□□ -0.3
LINC00888-202ENST00000471496 P4HA2O15460 535 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms