RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TNFRSF25Q93038 417 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 PNKPQ96T60 521 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 MSTO1Q9BUK6 570 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 ZHX3Q9H4I2 956 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 PLEKHA5Q9HAU0 1116 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 ARHGEF4Q9NR80 690 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 TMLHEQ9NVH6 421 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 ARHGAP28Q9P2N2 729 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 UXTQ9UBK9 157 aaPredicted RBP7.41□□□□□ -1.22
HDAC1-204ENST00000471488 DSEQ9UL01 958 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 SMG1Q96Q15 3661 aaKnown RBP7.41□□□□□ -1.22
HDAC1-204ENST00000471488 BPTFQ12830 3046 aa7.41□□□□□ -1.22
HDAC1-204ENST00000471488 TTC26A0AVF1 554 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 PP2D1A8MPX8 630 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 MEI4A8MW99 385 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 ABLIM1O14639 778 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 JAK2O60674 1132 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 PFKFB2O60825 505 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 KAT7O95251 611 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 CTDNEP1O95476 244 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 HMGA1P17096 107 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 CYP3A5P20815 502 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 CDC25AP30304 524 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 OPRD1P41143 372 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 ABCG1P45844 678 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 TAF6P49848 677 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 RPL10AP62906 217 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 MRPS21P82921 87 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 ATP2C1P98194 919 aaPredicted RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 MCL1Q07820 350 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 DHX8Q14562 1220 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 ENOX2Q16206 610 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 MAP7D1Q3KQU3 841 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 TTC38Q5R3I4 469 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 KRT79Q5XKE5 535 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 RINT1Q6NUQ1 792 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 KIAA1324Q6UXG2 1013 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 SLC36A4Q6YBV0 504 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 TOGARAM2Q6ZUX3 1019 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 RABEPKQ7Z6M1 372 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 SPATA2LQ8IUW3 424 aaPredicted RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 DAW1Q8N136 415 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 IL17RCQ8NAC3 791 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 OLIG1Q8TAK6 271 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 C2orf15Q8WU43 125 aaKnown RBP7.4□□□□□ -1.22
HDAC1-204ENST00000471488 ADAMTS14Q8WXS8 1223 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 CALCOCO1Q9P1Z2 691 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 HSFX1Q9UBD0 423 aa7.4□□□□□ -1.22
HDAC1-204ENST00000471488 CACNA1EQ15878 2313 aa7.4□□□□□ -1.23
HDAC1-204ENST00000471488 IGSF10Q6WRI0 2623 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 MYO16Q9Y6X6 1858 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 NPHP3-ACAD11A0A0J9YXS1 232 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 FAM221BA6H8Z2 402 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 TRABD2BA6NFA1 517 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 UPK3BL1B0FP48 263 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 UPK3BL2E5RIL1 263 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 PYCARD-AS1I3L0S3 204 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 K7ENM7 598 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 LEFTY2O00292 366 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 TADA3O75528 432 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 CAPNS1P04632 268 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 CYP17A1P05093 508 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 PLS3P13797 630 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 FDPSP14324 419 aaKnown RBP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 HOXB2P14652 356 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 GNSP15586 552 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 AARSP49588 968 aaKnown RBP eCLIP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 ACOT2P49753 483 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 MESP2Q0VG99 397 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 SMARCB1Q12824 385 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 USP4Q13107 963 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 ZNF268Q14587 947 aaPredicted RBP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 ANO4Q32M45 955 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 SV2CQ496J9 727 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 C10orf76Q5T2E6 689 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 SYCP2LQ5T4T6 812 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 SPATA1Q5VX52 437 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 BTBD8Q5XKL5 378 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 SLCO6A1Q86UG4 719 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 ZNF513Q8N8E2 541 aaPredicted RBP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 TMEM161BQ8NDZ6 487 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 LRRC15Q8TF66 581 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 SNX19Q92543 992 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 CDK5RAP3Q96JB5 506 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 UBL7Q96S82 380 aaPredicted RBP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 RAB34Q9BZG1 259 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 HAPLN2Q9GZV7 340 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 SLC6A17Q9H1V8 727 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 TMEM206Q9H813 350 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 CAPN10Q9HC96 672 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 DPP3Q9NY33 737 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 CFAP97Q9P2B7 532 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 DAXXQ9UER7 740 aaPredicted RBP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 GTF3C4Q9UKN8 822 aa7.39□□□□□ -1.23
HDAC1-204ENST00000471488 FLNBO75369 2602 aaKnown RBP7.39□□□□□ -1.23
HDAC1-204ENST00000471488 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.38□□□□□ -1.23
HDAC1-204ENST00000471488 CYSRT1A8MQ03 144 aa7.38□□□□□ -1.23
HDAC1-204ENST00000471488 KPNA7A9QM74 516 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms