RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ATG4AQ8WYN0 398 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 LRGUKQ96M69 825 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 INO80BQ9C086 356 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 GLOD4Q9HC38 313 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 FLRT1Q9NZU1 646 aa6.91□□□□□ -1.3
CCDC39-202ENST00000471307 NDRG4Q9ULP0 352 aaKnown RBP6.91□□□□□ -1.3
CCDC39-202ENST00000471307 CGB1A6NKQ9 187 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 TUSC2O75896 110 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 PDHA1P08559 390 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 ATXN1P54253 815 aaKnown RBP6.9□□□□□ -1.3
CCDC39-202ENST00000471307 MGAT5BQ3V5L5 792 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 TREML2Q5T2D2 321 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 GAS2L3Q86XJ1 694 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 OR6B3Q8NGW1 331 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 ANLNQ9NQW6 1124 aa6.9□□□□□ -1.3
CCDC39-202ENST00000471307 RUSC2Q8N2Y8 1516 aa6.9□□□□□ -1.31
CCDC39-202ENST00000471307 MANSC4A6NHS7 340 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 FAM227AF5H4B4 570 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 H0YIZ8 118 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 ERC2O15083 957 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 PHGDHO43175 533 aaKnown RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 NPR1P16066 1061 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 LIPAP38571 399 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 PDE6CP51160 858 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 EEFSECP57772 596 aaKnown RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 LLGL1Q15334 1064 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 ZBTB34Q8NCN2 500 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 PPP1R35Q8TAP8 253 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 DPF1Q92782 380 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 RUNDC1Q96C34 613 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 P2RX7Q99572 595 aaKnown RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 TMEM60Q9H2L4 133 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 DLL3Q9NYJ7 618 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 STAP2Q9UGK3 403 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 THRAP3Q9Y2W1 955 aaKnown RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 TDRD9Q8NDG6 1382 aaKnown RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 WDR97A6NE52 1622 aa6.89□□□□□ -1.31
CCDC39-202ENST00000471307 SETD1BQ9UPS6 1966 aaKnown RBP6.89□□□□□ -1.31
CCDC39-202ENST00000471307 GAPVD1Q14C86 1478 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 QSOX1O00391 747 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 CTNND1O60716 968 aaKnown RBP6.88□□□□□ -1.31
CCDC39-202ENST00000471307 LMO1P25800 156 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 SRSF4Q08170 494 aaKnown RBP6.88□□□□□ -1.31
CCDC39-202ENST00000471307 MINDY4Q4G0A6 757 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 FAM102BQ5T8I3 360 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 NXNQ6DKJ4 435 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 MTHFD1LQ6UB35 978 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 MAEAQ7L5Y9 396 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 SLC15A3Q8IY34 581 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 DNAJC5GQ8N7S2 189 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 SUCLG2Q96I99 432 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 SEMA4CQ9C0C4 833 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 ZMAT3Q9HA38 289 aaKnown RBP6.88□□□□□ -1.31
CCDC39-202ENST00000471307 DUSP22Q9NRW4 184 aa6.88□□□□□ -1.31
CCDC39-202ENST00000471307 A1L4Q6 167 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 BTN3A1O00481 513 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 ZNF213O14771 459 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 TJP3O95049 919 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 EN2P19622 333 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-202ENST00000471307 CYP2C18P33260 490 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 CLCN2P51788 898 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 TFF2Q03403 129 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 MYO1EQ12965 1108 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 RAB32Q13637 225 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 NFE2Q16621 373 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-202ENST00000471307 PLEKHG6Q3KR16 790 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 SLC44A4Q53GD3 710 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 NPNTQ6UXI9 565 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 PARS2Q7L3T8 475 aaKnown RBP6.87□□□□□ -1.31
CCDC39-202ENST00000471307 OVCH2Q7RTZ1 564 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 SLC15A4Q8N697 577 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 FANCBQ8NB91 859 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 REPS1Q96D71 796 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 FSD1LQ9BXM9 530 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 ZSCAN32Q9NX65 697 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 SERGEFQ9UGK8 458 aa6.87□□□□□ -1.31
CCDC39-202ENST00000471307 AQRO60306 1485 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC39-202ENST00000471307 S100BP04271 92 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-202ENST00000471307 FESP07332 822 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 CELA2AP08217 269 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 NPSP0C0P6 89 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 DGKEP52429 567 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 KRT17Q04695 432 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 TBC1D25Q3MII6 688 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 CHPFQ8IZ52 775 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 LRRC71Q8N4P6 559 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 SOCS4Q8WXH5 440 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 GLG1Q92896 1179 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 B3GNT5Q9BYG0 378 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 ZNF518BQ9C0D4 1074 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 CXorf36Q9H7Y0 433 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 C1orf112Q9NSG2 853 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 TRMT13Q9NUP7 481 aaKnown RBP6.86□□□□□ -1.31
CCDC39-202ENST00000471307 GABRQQ9UN88 632 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 ABCA5Q8WWZ7 1642 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 ERICH3Q5RHP9 1530 aa6.86□□□□□ -1.31
CCDC39-202ENST00000471307 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-202ENST00000471307 CAPN8A6NHC0 703 aa6.85□□□□□ -1.31
CCDC39-202ENST00000471307 FRS3O43559 492 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms