RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TRAV19A0A0A6YYK7 116 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 USP17L7P0C7H9 530 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 TMEM191BP0C7N4 346 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 HDCP19113 662 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 DRD1P21728 446 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 STAT6P42226 847 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 LHX1P48742 406 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 SEC13P55735 322 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
HDAC3-204ENST00000469207 PDGFRLQ15198 375 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 PLK5Q496M5 336 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 PLA2G2CQ5R387 149 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 STPG1Q5TH74 334 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 IL31Q6EBC2 164 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 SFTPA1Q8IWL2 248 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 GPD1LQ8N335 351 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 CAMKK1Q8N5S9 505 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 TOP6BLQ8N6T0 577 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 LRRC52Q8N7C0 313 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 C12orf50Q8NA57 414 aaPredicted RBP13.14□□□□□ -0.31
HDAC3-204ENST00000469207 MYLPFQ96A32 169 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
HDAC3-204ENST00000469207 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 RNF38Q9H0F5 515 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 ABCB6Q9NP58 842 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 INTS13Q9NVM9 706 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 MAGEC2Q9UBF1 373 aaPredicted RBP13.14□□□□□ -0.31
HDAC3-204ENST00000469207 UXTQ9UBK9 157 aaPredicted RBP13.14□□□□□ -0.31
HDAC3-204ENST00000469207 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 ITGA11Q9UKX5 1188 aa13.14□□□□□ -0.31
HDAC3-204ENST00000469207 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 CCDC163A0A0D9SF12 145 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 SOBPA7XYQ1 873 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 GRIK1P39086 918 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 MPLP40238 635 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 SLC6A11P48066 632 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 IFNAR2P48551 515 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 CYP27A1Q02318 531 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 MESP2Q0VG99 397 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 DMC1Q14565 340 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 CFAP221Q4G0U5 840 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 LIMS2Q7Z4I7 341 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 LOXL4Q96JB6 756 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
HDAC3-204ENST00000469207 MMS19Q96T76 1030 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 SYT15Q9BQS2 421 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 MRPL45Q9BRJ2 306 aaKnown RBP13.13□□□□□ -0.31
HDAC3-204ENST00000469207 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 LAMA1P25391 3075 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 EPG5Q9HCE0 2579 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 ACACBO00763 2458 aa13.13□□□□□ -0.31
HDAC3-204ENST00000469207 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 ANAPC1Q9H1A4 1944 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 K7EQS6 105 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 CLIC2O15247 247 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 ABL1P00519 1130 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 PCSK1P29120 753 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 TXLNAP40222 546 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 OPRD1P41143 372 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 DGKEP52429 567 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 AMPD2Q01433 879 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 CREB5Q02930 508 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 USP4Q13107 963 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 SLC39A14Q15043 492 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 ST3GAL2Q16842 350 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 SYT13Q7L8C5 426 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 ELMO3Q96BJ8 720 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 PCED1BQ96HM7 432 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 ANKRD36BP1Q96IX9 119 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 DPEP3Q9H4B8 488 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 TMEM206Q9H813 350 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 UPF2Q9HAU5 1272 aaKnown RBP13.12□□□□□ -0.31
HDAC3-204ENST00000469207 ZDHHC4Q9NPG8 344 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 TMEM30AQ9NV96 361 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 HSPBP1Q9NZL4 362 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
HDAC3-204ENST00000469207 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
HDAC3-204ENST00000469207 KMT2BQ9UMN6 2715 aaPredicted RBP13.12□□□□□ -0.31
HDAC3-204ENST00000469207 SPAG17Q6Q759 2223 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 LEFTY2O00292 366 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 GIPC1O14908 333 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 HNRNPLP14866 589 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDAC3-204ENST00000469207 BCKDHBP21953 392 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 CASP1P29466 404 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 LIMK1P53667 647 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 IFRD2Q12894 506 aaPredicted RBP13.11□□□□□ -0.31
HDAC3-204ENST00000469207 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 KCNB1Q14721 858 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
HDAC3-204ENST00000469207 MDH1BQ5I0G3 518 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms