RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 ERC2O15083 957 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 BCAR3O75815 825 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 RECQLP46063 649 aaPredicted RBP4.34□□□□□ -1.71
SSB-208ENST00000468600 LONRF3Q496Y0 759 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 RNF187Q5TA31 235 aaPredicted RBP4.34□□□□□ -1.71
SSB-208ENST00000468600 MTHFD1LQ6UB35 978 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 DLK2Q6UY11 383 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 PARS2Q7L3T8 475 aaKnown RBP4.34□□□□□ -1.71
SSB-208ENST00000468600 NRACQ8N912 160 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 FAM46DQ8NEK8 389 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 SLC46A1Q96NT5 459 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 LMBRD1Q9NUN5 540 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 ADAMTS5Q9UNA0 930 aa4.34□□□□□ -1.71
SSB-208ENST00000468600 WDR17Q8IZU2 1322 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 OAZ2O95190 189 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 FTLP02792 175 aaPredicted RBP4.33□□□□□ -1.72
SSB-208ENST00000468600 POU2F2P09086 479 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 TMEM191BP0C7N4 346 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 PXNP49023 591 aaPredicted RBP4.33□□□□□ -1.72
SSB-208ENST00000468600 MAP2K6P52564 334 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 CYP4F2P78329 520 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 IQCB1Q15051 598 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 CERKLQ49MI3 558 aaPredicted RBP4.33□□□□□ -1.72
SSB-208ENST00000468600 TMEM240Q5SV17 173 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 SHC4Q6S5L8 630 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 IRF2BP2Q7Z5L9 587 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 CHSY1Q86X52 802 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 PRPF38AQ8NAV1 312 aaKnown RBP4.33□□□□□ -1.72
SSB-208ENST00000468600 ACRBPQ8NEB7 543 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 MOGAT1Q96PD6 335 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 THAP7Q9BT49 309 aaPredicted RBP4.33□□□□□ -1.72
SSB-208ENST00000468600 PNPOQ9NVS9 261 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 GABRQQ9UN88 632 aa4.33□□□□□ -1.72
SSB-208ENST00000468600 WASHC2CQ9Y4E1 1318 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 AHSGP02765 367 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 NPSP0C0P6 89 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 KRT10P13645 584 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 CCND1P24385 295 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 VIPR2P41587 438 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 CLCN2P51788 898 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 NKX6-1P78426 367 aaPredicted RBP4.32□□□□□ -1.72
SSB-208ENST00000468600 AMPD3Q01432 767 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 SP2Q02086 613 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 TWIST1Q15672 202 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 TBC1D25Q3MII6 688 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 AMOTQ4VCS5 1084 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 LAYNQ6UX15 382 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 NAPRTQ6XQN6 538 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 TRIM72Q6ZMU5 477 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 ATG4AQ8WYN0 398 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 SERTAD3Q9UJW9 196 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 PLEKHM1Q9Y4G2 1056 aa4.32□□□□□ -1.72
SSB-208ENST00000468600 TTC3P53804 2025 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 A1L4Q6 167 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 USP1O94782 785 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 FESP07332 822 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 ENGP17813 658 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 EXOSC9Q06265 439 aaKnown RBP4.31□□□□□ -1.72
SSB-208ENST00000468600 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 Q6ZWC4 215 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 LRRC71Q8N4P6 559 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 CYP2W1Q8TAV3 490 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 BRIX1Q8TDN6 353 aaKnown RBP4.31□□□□□ -1.72
SSB-208ENST00000468600 RITA1Q96K30 269 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 ASPSCR1Q9BZE9 553 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 TTYH3Q9C0H2 523 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 GLOD4Q9HC38 313 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 KLHL13Q9P2N7 655 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 PCDHA1Q9Y5I3 950 aa4.31□□□□□ -1.72
SSB-208ENST00000468600 POC1B-GALNT4F8VUJ3 575 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 CHRM5P08912 532 aaPredicted RBP4.3□□□□□ -1.72
SSB-208ENST00000468600 DLDP09622 509 aaKnown RBP4.3□□□□□ -1.72
SSB-208ENST00000468600 THBS3P49746 956 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 PDE1AP54750 535 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 LILRA4P59901 499 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 E2F2Q14209 437 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 PLS1Q14651 629 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 GALNT4Q8N4A0 578 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 C16orf52Q8NHV5 167 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 SOCS4Q8WXH5 440 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 GLG1Q92896 1179 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 CUL5Q93034 780 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
SSB-208ENST00000468600 LYZL4Q96KX0 146 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 SNX18Q96RF0 628 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 MACROD1Q9BQ69 325 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 NDRG4Q9ULP0 352 aaKnown RBP4.3□□□□□ -1.72
SSB-208ENST00000468600 SHOC2Q9UQ13 582 aa4.3□□□□□ -1.72
SSB-208ENST00000468600 FAM90A8PA6NJQ4 464 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 FAM90A13PP0C7W8 464 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 FAM90A24PP0C7X0 464 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 CYP2C9P11712 490 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 HDCP19113 662 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 AKAP5P24588 427 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 IL1R2P27930 398 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 LRPAP1P30533 357 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms