RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C10orf82Q8WW14 230 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 NIFKQ9BYG3 293 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 SPON1Q9HCB6 807 aa16.57■□□□□ 0.24
TSPAN4-211ENST00000468468 PTPRFP10586 1907 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 FGFR1P11362 822 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 EIF4BP23588 611 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 CALRP27797 417 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 RFC1P35251 1148 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 TRPC3Q13507 836 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 MSS51Q4VC12 460 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 KCNT1Q5JUK3 1230 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 EEPD1Q7L9B9 569 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 OTOAQ7RTW8 1153 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 AGGF1Q8N302 714 aaeCLIP16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 DNERQ8NFT8 737 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 CPT1BQ92523 772 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 SPATC1LQ9H0A9 340 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 SOWAHBA6NEL2 793 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 CST8O60676 142 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 ATP2A2P16615 1042 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 GCKP35557 465 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 GRIK3Q13003 919 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 ZNF449Q6P9G9 518 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 C3orf62Q6ZUJ4 267 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 RHPN2Q8IUC4 686 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 RIOX2Q8IUF8 465 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 ATP11CQ8NB49 1132 aa16.56■□□□□ 0.24
TSPAN4-211ENST00000468468 WDR91A4D1P6 747 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 WFS1O76024 890 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 ZWINTO95229 277 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 SLC8A3P57103 927 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 SEPT7Q16181 437 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 DUOXA2Q1HG44 320 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 DENND1BQ6P3S1 775 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 POLNQ7Z5Q5 900 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 JOSD2Q8TAC2 188 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 RSAD2Q8WXG1 361 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 PCDHGC3Q9UN70 934 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 OTOFQ9HC10 1997 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 SIP14410 1827 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 T-ENOLP0DO92 83 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 KRT3P12035 628 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 IL1R2P27930 398 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 CDH5P33151 784 aaPredicted RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 RPL22P35268 128 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 RFC5P40937 340 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 MTM1Q13496 603 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 ZPBP2Q6X784 338 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 NAT8LQ8N9F0 302 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 ZNF570Q96NI8 536 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 PAFAH2Q99487 392 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 SSU72Q9NP77 194 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 NRBP2Q9NSY0 501 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 FAM189A1O60320 539 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 AP1G2O75843 785 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 UBA1P22314 1058 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 ADRA1DP25100 572 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 ICAM3P32942 547 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 IREB2P48200 963 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 TFAMQ00059 246 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 SLC25A11Q02978 314 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 TTLL12Q14166 644 aaPredicted RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 MAPK6Q16659 721 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 ADGRD1Q6QNK2 874 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 ARFGAP1Q8N6T3 406 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 MAB21L3Q8N8X9 362 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 TTC13Q8NBP0 860 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 FBXO36Q8NEA4 188 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 PRPF31Q8WWY3 499 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 INPP5DQ92835 1189 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 TJP2Q9UDY2 1190 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 STRIP2Q9ULQ0 834 aa16.55■□□□□ 0.24
TSPAN4-211ENST00000468468 LRCH4O75427 683 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 TOM1L1O75674 476 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 KRT7P08729 469 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 GRM1Q13255 1194 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 PTPN20Q4JDL3 420 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 PALM2Q8IXS6 379 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 SLC7A6OSQ96CW6 309 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 PCYT2Q99447 389 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 MRPL4Q9BYD3 311 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 ASCC2Q9H1I8 757 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 NPHS2Q9NP85 383 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 CYLDQ9NQC7 956 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 EFR3BQ9Y2G0 817 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 SH3BP1Q9Y3L3 701 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 A0A0G2JLL6 359 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 SIGLEC16A6NMB1 481 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 GOLGA8RI6L899 631 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 MSCO60682 206 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 CBX6O95503 412 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 CD19P15391 556 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 KDELR1P24390 212 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 POLR2BP30876 1174 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 TARBP2Q15633 366 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 KLHL38Q2WGJ6 581 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 ZNF699Q32M78 642 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms