RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TRIM54Q9BYV2 358 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 SIK2Q9H0K1 926 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 SMURF2Q9HAU4 748 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 PCDHA6Q9UN73 950 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 BTBD3Q9Y2F9 522 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 FNDC1Q4ZHG4 1894 aaPredicted RBP5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 CAPN8A6NHC0 703 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 JTBO76095 146 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 NXPH3O95157 252 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 CD6P30203 668 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 SOX8P57073 446 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 TBX4P57082 545 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 EXOSC9Q06265 439 aaKnown RBP5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 HLTFQ14527 1009 aaKnown RBP eCLIP5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 TEDDM1Q5T9Z0 273 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 NEK8Q86SG6 692 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 DAAM2Q86T65 1068 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 BRIX1Q8TDN6 353 aaKnown RBP5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 MAML1Q92585 1016 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 TBC1D5Q92609 795 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 SARGQ9BW04 601 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 ARHGEF3Q9NR81 526 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 STAP2Q9UGK3 403 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 RAD54BQ9Y620 910 aa5.56□□□□□ -1.52
PRPF40A-205ENST00000467114 USP19O94966 1318 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 PHGDHO43175 533 aaKnown RBP5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 KIF20AO95235 890 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 FAM163BP0C2L3 166 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 SLC5A1P13866 664 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 TRIM27P14373 513 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 NDUFB7P17568 137 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 CERS1P27544 350 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 PHKA1P46020 1223 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 BOP1Q14137 746 aaKnown RBP5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 HSP90AB2PQ58FF8 381 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 CCDC181Q5TID7 509 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 VPS53Q5VIR6 699 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 ANKRD16Q6P6B7 361 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 ZNF66Q6ZN08 573 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 DTX2Q86UW9 622 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 KBTBD7Q8WVZ9 684 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 TNPO1Q92973 898 aaKnown RBP5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 NELL2Q99435 816 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 SERHLQ9NQF3 203 aa5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 RGS17Q9UGC6 210 aaPredicted RBP5.55□□□□□ -1.52
PRPF40A-205ENST00000467114 ZNF213O14771 459 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 TBX3O15119 743 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 MYF5P13349 255 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 EN2P19622 333 aaPredicted RBP5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 CHRM3P20309 590 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 EPHB2P29323 1055 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 PTGER1P34995 402 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 GCLCP48506 637 aaPredicted RBP5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 TUBA4AP68366 448 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 KHDC1LQ5JSQ8 128 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 ZNF618Q5T7W0 954 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 RNF220Q5VTB9 566 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 MORN5Q5VZ52 161 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 KRT78Q8N1N4 520 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 DDX17Q92841 729 aaKnown RBP5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 RPL36ALQ969Q0 106 aaKnown RBP5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 FAM204AQ9H8W3 233 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 STK32BQ9NY57 414 aa5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.54□□□□□ -1.52
PRPF40A-205ENST00000467114 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 TISP43B9A030 160 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 VPS4BO75351 444 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 FAM193AP78312 1265 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 KLF9Q13886 244 aaPredicted RBP5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 AARS2Q5JTZ9 985 aaKnown RBP5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 SLC29A4Q7RTT9 530 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 USP37Q86T82 979 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 MTFMTQ96DP5 389 aaKnown RBP5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 APIPQ96GX9 242 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 SLC39A13Q96H72 371 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 P2RX7Q99572 595 aaKnown RBP5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 ARNT2Q9HBZ2 717 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 SARS2Q9NP81 518 aaKnown RBP5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 SLAMF7Q9NQ25 335 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 NRIP3Q9NQ35 241 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 PIH1D1Q9NWS0 290 aaKnown RBP5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 SH3BP4Q9P0V3 963 aa5.53□□□□□ -1.52
PRPF40A-205ENST00000467114 GOLIM4O00461 696 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 DCLK1O15075 740 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 PPM1DO15297 605 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 KCNAB3O43448 404 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 PDHA1P08559 390 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 NHLRC4P0CG21 123 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 KITP10721 976 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 PIM1P11309 404 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 ALDH9A1P49189 494 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 CACNB3P54284 484 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 POLD3Q15054 466 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 CCDC157Q569K6 752 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 SFRP4Q6FHJ7 346 aaPredicted RBP5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 ZNF804AQ7Z570 1209 aa5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 YTHDF3Q7Z739 585 aaKnown RBP5.52□□□□□ -1.53
PRPF40A-205ENST00000467114 MICU3Q86XE3 530 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms