RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 E2F8A0AVK6 867 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 EML1O00423 815 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 F11P03951 625 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 USP17L7P0C7H9 530 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 SFTPCP11686 197 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 ATF6P18850 670 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 NDUFV2P19404 249 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 CD6P30203 668 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 EIF2DP41214 584 aaKnown RBP13.72□□□□□ -0.21
UBR4-210ENST00000466969 GRIA2P42262 883 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 LIFRP42702 1097 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 DNAJC3Q13217 504 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 MYBPC2Q14324 1141 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 DCAF12L1Q5VU92 463 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 CCDC81Q6ZN84 652 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 TMEM150AQ86TG1 271 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 LSMEM2Q8N112 164 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 CNDP2Q96KP4 475 aaKnown RBP13.72□□□□□ -0.21
UBR4-210ENST00000466969 LXNQ9BS40 222 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 TRPC7Q9HCX4 862 aa13.72□□□□□ -0.21
UBR4-210ENST00000466969 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
UBR4-210ENST00000466969 DGAT1O75907 488 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 LARGE1O95461 756 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 CKMP06732 381 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 CHRM1P11229 460 aaPredicted RBP13.71□□□□□ -0.21
UBR4-210ENST00000466969 SLC6A11P48066 632 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 CSNK1EP49674 416 aaKnown RBP13.71□□□□□ -0.21
UBR4-210ENST00000466969 AFF3P51826 1226 aaKnown RBP13.71□□□□□ -0.21
UBR4-210ENST00000466969 RESTQ13127 1097 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 KIF19Q2TAC6 998 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 APBB1IPQ7Z5R6 666 aaPredicted RBP13.71□□□□□ -0.21
UBR4-210ENST00000466969 CACTIN-AS1Q8N1I8 211 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 CADM4Q8NFZ8 388 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 BICD2Q8TD16 824 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 KCNV2Q8TDN2 545 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 GPR174Q9BXC1 333 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 POLR3FQ9H1D9 316 aaPredicted RBP13.71□□□□□ -0.21
UBR4-210ENST00000466969 TMEM206Q9H813 350 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 SNX11Q9Y5W9 270 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.21
UBR4-210ENST00000466969 TLN1Q9Y490 2541 aaKnown RBP13.71□□□□□ -0.21
UBR4-210ENST00000466969 DENND4CQ5VZ89 1909 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 A0A0A0MRY4 1105 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 TRAV19A0A0A6YYK7 116 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
UBR4-210ENST00000466969 LIG1P18858 919 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 MCM5P33992 734 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 HSPA4P34932 840 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 TNFSF9P41273 254 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 ACADVLP49748 655 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 ERVPABLB-1P60509 514 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 KDSRQ06136 332 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 MESP2Q0VG99 397 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 DMP1Q13316 513 aaPredicted RBP13.7□□□□□ -0.22
UBR4-210ENST00000466969 TEAD4Q15561 434 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 GAB4Q2WGN9 574 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 EEF1DP3Q658K8 133 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 SH3RF2Q8TEC5 729 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 IGSF8Q969P0 613 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 TOE1Q96GM8 510 aaKnown RBP13.7□□□□□ -0.22
UBR4-210ENST00000466969 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
UBR4-210ENST00000466969 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
UBR4-210ENST00000466969 C2orf40Q9H1Z8 148 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 CD93Q9NPY3 652 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 EIF2B4Q9UI10 523 aaKnown RBP13.7□□□□□ -0.22
UBR4-210ENST00000466969 SETD2Q9BYW2 2564 aaPredicted RBP13.7□□□□□ -0.22
UBR4-210ENST00000466969 ANK1P16157 1881 aa13.7□□□□□ -0.22
UBR4-210ENST00000466969 LRBAP50851 2863 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 TBC1D3BA6NDS4 549 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 M0QZQ0 153 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 KCNK3O14649 394 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 ZBTB39O15060 712 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 EDIL3O43854 480 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 ITGB6P18564 788 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 NTSR1P30989 418 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 WASP42768 502 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 INHBCP55103 352 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 IL9RQ01113 521 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 SDE2Q6IQ49 451 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 KIAA1324Q6UXG2 1013 aaKnown RBP13.69□□□□□ -0.22
UBR4-210ENST00000466969 KDM7AQ6ZMT4 941 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 NUDT18Q6ZVK8 323 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
UBR4-210ENST00000466969 ZSWIM4Q9H7M6 989 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 MAGED2Q9UNF1 606 aaPredicted RBP13.69□□□□□ -0.22
UBR4-210ENST00000466969 USP20Q9Y2K6 914 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 NBASA2RRP1 2371 aa13.69□□□□□ -0.22
UBR4-210ENST00000466969 A0A1W2PQF6 199 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 BTBD18B2RXH4 712 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 CBX4O00257 560 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 LAD1O00515 517 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 ACKR2O00590 384 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 CYP17A1P05093 508 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 PPP2R5CQ13362 524 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
UBR4-210ENST00000466969 LINC00303Q3SY05 128 aa13.68□□□□□ -0.22
UBR4-210ENST00000466969 SGO2Q562F6 1265 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms