RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 MYLIPQ8WY64 445 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 RHOBTB2Q9BYZ6 727 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 CRISPLD1Q9H336 500 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 CYP4F11Q9HBI6 524 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 MAN1C1Q9NR34 630 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 TSPAN16Q9UKR8 245 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 INSL5Q9Y5Q6 135 aa16.1■□□□□ 0.17
NPHP4-205ENST00000466897 BZW2Q9Y6E2 419 aaKnown RBP16.1■□□□□ 0.17
NPHP4-205ENST00000466897 AKR1B15C9JRZ8 316 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-205ENST00000466897 PRRG1O14668 218 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 ZMYND10O75800 440 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 SEC24AO95486 1093 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 GLP2RO95838 553 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 HNRNPA1P09651 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
NPHP4-205ENST00000466897 SETSIPP0DME0 302 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 FOSL2P15408 326 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 EPCAMP16422 314 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 NPR3P17342 541 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 BDNFP23560 247 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 CYP2F1P24903 491 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 SLC8A3P57103 927 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 RPL10AP62906 217 aaKnown RBP16.09■□□□□ 0.17
NPHP4-205ENST00000466897 CDR2Q01850 454 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 ADAM15Q13444 863 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 E4F1Q66K89 784 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-205ENST00000466897 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
NPHP4-205ENST00000466897 CMASQ8NFW8 434 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-205ENST00000466897 SPATA17Q96L03 361 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 C8orf48Q96LL4 319 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 MED10Q9BTT4 135 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 DUSP16Q9BY84 665 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 DMAP1Q9NPF5 467 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-205ENST00000466897 ACP6Q9NPH0 428 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 KRT82Q9NSB4 513 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 ABHD10Q9NUJ1 306 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 HESX1Q9UBX0 185 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 YIPF1Q9Y548 306 aa16.09■□□□□ 0.17
NPHP4-205ENST00000466897 GOLGA6L6A8MZA4 724 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 CLDN5O00501 218 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 AP1G2O75843 785 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 MICAL2O94851 1124 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 LSM8O95777 96 aaKnown RBP16.08■□□□□ 0.16
NPHP4-205ENST00000466897 SERPING1P05155 500 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 C8AP07357 584 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 CDH5P33151 784 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-205ENST00000466897 CDK17Q00537 523 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 BST2Q10589 180 aaKnown RBP16.08■□□□□ 0.16
NPHP4-205ENST00000466897 GOLGA7BQ2TAP0 167 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 MGAT5BQ3V5L5 792 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 CYP26C1Q6V0L0 522 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 TRIM72Q6ZMU5 477 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 TTC30AQ86WT1 665 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 TC2NQ8N9U0 490 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 VN1R2Q8NFZ6 395 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 SLC7A14Q8TBB6 771 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 PABPC5Q96DU9 382 aaKnown RBP16.08■□□□□ 0.16
NPHP4-205ENST00000466897 SYT11Q9BT88 431 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 SFXN1Q9H9B4 322 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 ASB3Q9Y575 518 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 DENND4AQ7Z401 1863 aa16.08■□□□□ 0.16
NPHP4-205ENST00000466897 M0QYV0 167 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 XPO1O14980 1071 aaKnown RBP16.07■□□□□ 0.16
NPHP4-205ENST00000466897 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-205ENST00000466897 ANXA13P27216 316 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 ADORA2BP29275 332 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 GTF2F1P35269 517 aaKnown RBP eCLIP16.07■□□□□ 0.16
NPHP4-205ENST00000466897 PLA2G4AP47712 749 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 ALDH1A3P47895 512 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 ARID5AQ03989 594 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
NPHP4-205ENST00000466897 HGSNATQ68CP4 663 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 ZMIZ2Q8NF64 920 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
NPHP4-205ENST00000466897 PANX2Q96RD6 677 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 SEPT5Q99719 369 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-205ENST00000466897 SMOQ99835 787 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 CYLDQ9NQC7 956 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 TMEM30AQ9NV96 361 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 SLC27A5Q9Y2P5 690 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
NPHP4-205ENST00000466897 NOTCH4Q99466 2003 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 F8VP50 259 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 CALCAP01258 141 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 SPATA31D3P0C874 917 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 ATF6P18850 670 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 FECHP22830 423 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 GRIK1P39086 918 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 GPD2P43304 727 aa16.06■□□□□ 0.16
NPHP4-205ENST00000466897 RPL34P49207 117 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms