RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 AFF4Q9UHB7 1163 aaKnown RBP4.86□□□□□ -1.63
CALD1-214ENST00000466704 SERTAD3Q9UJW9 196 aa4.86□□□□□ -1.63
CALD1-214ENST00000466704 TLK1Q9UKI8 766 aa4.86□□□□□ -1.63
CALD1-214ENST00000466704 PCDHGB6Q9Y5F9 930 aa4.86□□□□□ -1.63
CALD1-214ENST00000466704 CARMIL1Q5VZK9 1371 aa4.86□□□□□ -1.63
CALD1-214ENST00000466704 RUSC2Q8N2Y8 1516 aa4.86□□□□□ -1.63
CALD1-214ENST00000466704 TMEM233B4DJY2 109 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 ADM5C9JUS6 153 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 KIAA0355O15063 1070 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 SUV39H1O43463 412 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 NUDT3O95989 172 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 HMGB1P09429 215 aaKnown RBP4.85□□□□□ -1.63
CALD1-214ENST00000466704 BMP5P22003 454 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 PPIFP30405 207 aaKnown RBP4.85□□□□□ -1.63
CALD1-214ENST00000466704 GRIA3P42263 894 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 MAPK10P53779 464 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 SIM1P81133 766 aaPredicted RBP4.85□□□□□ -1.63
CALD1-214ENST00000466704 TBCCQ15814 346 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 TEDDM1Q5T9Z0 273 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 STRIP1Q5VSL9 837 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 KIAA0895LQ68EN5 471 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 RGS7BPQ6MZT1 257 aaPredicted RBP4.85□□□□□ -1.63
CALD1-214ENST00000466704 CCAR1Q8IX12 1150 aaKnown RBP4.85□□□□□ -1.63
CALD1-214ENST00000466704 FAM109AQ8N4B1 249 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 ATRIPQ8WXE1 791 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 MAML1Q92585 1016 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 FKBP10Q96AY3 582 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 ZG16BQ96DA0 208 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 A1CFQ9NQ94 594 aaKnown RBP4.85□□□□□ -1.63
CALD1-214ENST00000466704 FOXJ2Q9P0K8 574 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 C11orf21Q9P2W6 132 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 ADGRA2Q96PE1 1338 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 GRIN2AQ12879 1464 aa4.85□□□□□ -1.63
CALD1-214ENST00000466704 ADAMTS12P58397 1594 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 ZAR1LA6NP61 321 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 hCG_1984214I3L0E3 225 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 TLR5O60602 858 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 RASSF9O75901 435 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 TTLL1O95922 423 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 PDHA1P08559 390 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 NR2F6P10588 404 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 RARRES1P49788 294 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 PRKAG1P54619 331 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 INHBEP58166 350 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 COL10A1Q03692 680 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 SEMA5AQ13591 1074 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 BMPR2Q13873 1038 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 PRR16Q569H4 304 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 DCAF12L1Q5VU92 463 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 GRASPQ7Z6J2 395 aaPredicted RBP4.84□□□□□ -1.63
CALD1-214ENST00000466704 ZNF280BQ86YH2 543 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 SLC15A3Q8IY34 581 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 SPSB4Q96A44 273 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 NMD3Q96D46 503 aaKnown RBP4.84□□□□□ -1.63
CALD1-214ENST00000466704 PDLIM2Q96JY6 352 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 MESP1Q9BRJ9 268 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 APOL5Q9BWW9 433 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 STK32BQ9NY57 414 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 NDRG4Q9ULP0 352 aaKnown RBP4.84□□□□□ -1.63
CALD1-214ENST00000466704 MRPS17Q9Y2R5 130 aaKnown RBP4.84□□□□□ -1.63
CALD1-214ENST00000466704 INSL6Q9Y581 213 aa4.84□□□□□ -1.63
CALD1-214ENST00000466704 NUP160Q12769 1436 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 WDR27A2RRH5 827 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 TRIM43BA6NCK2 446 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 MBD3L4A6NDZ8 208 aaPredicted RBP4.83□□□□□ -1.64
CALD1-214ENST00000466704 MBD3L3A6NE82 208 aaPredicted RBP4.83□□□□□ -1.64
CALD1-214ENST00000466704 VWC2LB2RUY7 222 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 PYCARD-AS1I3L0S3 204 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 URI1O94763 535 aaPredicted RBP4.83□□□□□ -1.64
CALD1-214ENST00000466704 NXPH3O95157 252 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 ZFXP17010 805 aaPredicted RBP4.83□□□□□ -1.64
CALD1-214ENST00000466704 FMO1Q01740 532 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 MYO1EQ12965 1108 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 GALEQ14376 348 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 SMN1Q16637 294 aaKnown RBP4.83□□□□□ -1.64
CALD1-214ENST00000466704 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 PLAC9Q5JTB6 97 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 GAS2L3Q86XJ1 694 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 SIMC1Q8NDZ2 872 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 TRIM43Q96BQ3 446 aaPredicted RBP4.83□□□□□ -1.64
CALD1-214ENST00000466704 PPP1R9BQ96SB3 815 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 STK31Q9BXU1 1019 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 NUP62CLQ9H1M0 184 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 SYNPO2LQ9H987 977 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 GLOD4Q9HC38 313 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 SERHLQ9NQF3 203 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 GEMIN8Q9NWZ8 242 aaKnown RBP4.83□□□□□ -1.64
CALD1-214ENST00000466704 SLC17A6Q9P2U8 582 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 HDAC9Q9UKV0 1011 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 FAM50BQ9Y247 325 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 SNX13Q9Y5W8 968 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 PBRM1Q86U86 1689 aa4.83□□□□□ -1.64
CALD1-214ENST00000466704 EEA1Q15075 1411 aa4.82□□□□□ -1.64
CALD1-214ENST00000466704 LINC00473A8K010 186 aa4.82□□□□□ -1.64
CALD1-214ENST00000466704 MGST3O14880 152 aa4.82□□□□□ -1.64
CALD1-214ENST00000466704 SLC16A3O15427 465 aaKnown RBP4.82□□□□□ -1.64
CALD1-214ENST00000466704 PQBP1O60828 265 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms