RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 A0A087WZ62 844 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 A0A0B4J269 797 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 MARCH11A6NNE9 402 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 SYT5O00445 386 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 RRP9O43818 475 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 EGR1P18146 543 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 CHRM3P20309 590 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 SLC5A2P31639 672 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 SERPINF1P36955 418 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 NPTX2P47972 431 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 PLP2Q04941 152 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 TUBB3Q13509 450 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 NFIXQ14938 502 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 FAXCQ5TGI0 409 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 ICE2Q659A1 982 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 GGT6Q6P531 493 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 ADGRG5Q8IZF4 528 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 CACNA2D3Q8IZS8 1091 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 FAM9AQ8IZU1 332 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 SPARTQ8N0X7 666 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 FAM109AQ8N4B1 249 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 MYCT1Q8N699 235 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 FAM71BQ8TC56 605 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 TRAPPC12Q8WVT3 735 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 EID2BQ96D98 161 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZDHHC12Q96GR4 267 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 INTS13Q9NVM9 706 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 LUZP4Q9P127 313 aa5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 NDRG4Q9ULP0 352 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZMYND8Q9ULU4 1186 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-211ENST00000466538 A0A0G2JLL6 359 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 CCDC189A1A4V9 331 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 LGALS16A8MUM7 142 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 K7ESM1 405 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 RGS10O43665 173 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 PIAS2O75928 621 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 RASAL1O95294 804 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 GLP2RO95838 553 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 PEX11BO96011 259 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 PRKAR1BP31321 381 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 ATICP31939 592 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 VAV2P52735 878 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 PRKAG1P54619 331 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 GALNT1Q10472 559 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 CCNIQ14094 377 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 SLC5A9Q2M3M2 681 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 TRIM71Q2Q1W2 868 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 BEAN1Q3B7T3 259 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 ZIK1Q3SY52 487 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 PREPLQ4J6C6 727 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 CACHD1Q5VU97 1274 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 TTLL10Q6ZVT0 673 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 NACC2Q96BF6 587 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 C18orf8Q96DM3 657 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 BDH2Q9BUT1 245 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 TMEM120AQ9BXJ8 343 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 TEX101Q9BY14 249 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 ALOXE3Q9BYJ1 711 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 AMBRA1Q9C0C7 1298 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 KLC2Q9H0B6 622 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 PCDHAC1Q9H158 963 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 DACT1Q9NYF0 836 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 TBC1D30Q9Y2I9 924 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 DGKBQ9Y6T7 804 aa5.15□□□□□ -1.59
CDC42BPA-211ENST00000466538 OR2W5A6NFC9 320 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 hCG_1984214I3L0E3 225 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 MUSKO15146 869 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 NPHP1O15259 732 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 CCNT2O60583 730 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 NCR1O76036 304 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 ITGA5P08648 1049 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 LAG3P18627 525 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 CD6P30203 668 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 MC2RQ01718 297 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 NSUN2Q08J23 767 aaKnown RBP eCLIP5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 RESTQ13127 1097 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 PPFIA1Q13136 1202 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 BIRC3Q13489 604 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 CD300EQ496F6 205 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 RBM20Q5T481 1227 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 CERCAMQ5T4B2 595 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 ARHGAP40Q5TG30 622 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 MANEALQ5VSG8 457 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 ZNF585AQ6P3V2 769 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 CRTC1Q6UUV9 634 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 LDHAL6AQ6ZMR3 332 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 USP49Q70CQ1 688 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 KCTD20Q7Z5Y7 419 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 CCDC28AQ8IWP9 274 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 SLC15A3Q8IY34 581 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 ATG16L2Q8NAA4 619 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 RSC1A1Q92681 617 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 MYEOVQ96EZ4 313 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 MAGEH1Q9H213 219 aa5.14□□□□□ -1.59
CDC42BPA-211ENST00000466538 CXorf36Q9H7Y0 433 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms