RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 FGFR1P11362 822 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CD19P15391 556 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TIMP2P16035 220 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CD58P19256 250 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 SCNN1AP37088 669 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 NDST1P52848 882 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 BCAT1P54687 386 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 RAD23BP54727 409 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 HADHBP55084 474 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 GSCP56915 257 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 HTRA4P83105 476 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 PLCB3Q01970 1234 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CENPCQ03188 943 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 UBE3AQ05086 875 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 SOX4Q06945 474 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TUBB2AQ13885 445 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 BTG3Q14201 252 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 USP41Q3LFD5 358 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TMEM240Q5SV17 173 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CCDC122Q5T0U0 273 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 OVOS1Q6IE37 1185 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 ACAD10Q6JQN1 1059 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF280DQ6N043 979 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 GJB7Q6PEY0 223 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF365Q70YC5 407 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 RTL10Q7L3V2 364 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF571Q7Z3V5 609 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 SLC47A2Q86VL8 602 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 PHF13Q86YI8 300 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 C7orf61Q8IZ16 206 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 SYCE1Q8N0S2 351 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CCAR2Q8N163 923 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 FIBCD1Q8N539 461 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 ANKRD52Q8NB46 1076 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 SLC4A11Q8NBS3 891 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 C1orf131Q8NDD1 294 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TRIM58Q8NG06 486 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 KCNV2Q8TDN2 545 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 DDX1Q92499 740 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 BADQ92934 168 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TMEM169Q96HH4 297 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 FUBP3Q96I24 572 aaKnown RBP eCLIP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 HSFY1Q96LI6 401 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 HEXIM2Q96MH2 286 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 ALS2CR12Q96Q35 445 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 CHP1Q99653 195 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 HNRNPABQ99729 332 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 SYT11Q9BT88 431 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TUBB2BQ9BVA1 445 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TRIM62Q9BVG3 475 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 NRDE2Q9H7Z3 1164 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 PNPLA8Q9NP80 782 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 AVENQ9NQS1 362 aaPredicted RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 RNF19AQ9NV58 838 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 EHD2Q9NZN4 543 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 UVRAGQ9P2Y5 699 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 NOCTQ9UK39 431 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 GTF3C4Q9UKN8 822 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 L1RE1Q9UN81 338 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 LZTS1Q9Y250 596 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 PCDHA13Q9Y5I0 950 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 MICAL3Q7RTP6 2002 aa6.37□□□□□ -1.39
CHMP3-206ENST00000466032 TDRD15B5MCY1 1934 aaKnown RBP6.37□□□□□ -1.39
CHMP3-206ENST00000466032 A0A087X0T9 212 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 CCDC85CA6NKD9 419 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 MEIS3P2A8K0S8 358 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 DDX3XO00571 662 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SART1O43290 800 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 DDHD2O94830 711 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 GALTP07902 379 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 FAM228BP0C875 321 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 UNGP13051 313 aaPredicted RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ATP2A2P16615 1042 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 PTPN1P18031 435 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ARHGAP25P42331 645 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 BCAR1P56945 870 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 GPC5P78333 572 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 FMO1Q01740 532 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 BST2Q10589 180 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF268Q14587 947 aaPredicted RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ACAP1Q15027 740 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 PTPN14Q15678 1187 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 CLUL1Q15846 466 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 PTPN21Q16825 1174 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 CLEC16AQ2KHT3 1053 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 TIGD5Q53EQ6 642 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 DNTTIP2Q5QJE6 756 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SPOUT1Q5T280 376 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 E4F1Q66K89 784 aaPredicted RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 PDE12Q6L8Q7 609 aaKnown RBP6.36□□□□□ -1.39
CHMP3-206ENST00000466032 FUT10Q6P4F1 479 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 KCNT2Q6UVM3 1135 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 VSTM1Q6UX27 236 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 RAD9BQ6WBX8 426 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SCARA5Q6ZMJ2 495 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ARCQ7LC44 396 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 ZNF280BQ86YH2 543 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 GLYCTKQ8IVS8 523 aa6.36□□□□□ -1.39
CHMP3-206ENST00000466032 SCML4Q8N228 414 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms