RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 SYCP3Q8IZU3 236 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 ANKRD20A12PQ8NF67 263 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 TMEM174Q8WUU8 243 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 ING5Q8WYH8 240 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 PPP1R9BQ96SB3 815 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 OXCT2Q9BYC2 517 aaPredicted RBP10.14□□□□□ -0.79
ATG3-203ENST00000465980 RHOBTB2Q9BYZ6 727 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 HAPLN2Q9GZV7 340 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 CNTN3Q9P232 1028 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 IGSF9Q9P2J2 1179 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 CA14Q9ULX7 337 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 COL4A3Q01955 1670 aa10.14□□□□□ -0.79
ATG3-203ENST00000465980 TICRRQ7Z2Z1 1910 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 A0A1B0GTH6 734 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 PRRG1O14668 218 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 CETN3O15182 167 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 GNA14O95837 355 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 C1RP00736 705 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 NR3C1P04150 777 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 ITGB2P05107 769 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 HNRNPA1P09651 372 aaKnown RBP eCLIP10.13□□□□□ -0.79
ATG3-203ENST00000465980 LAMP2P13473 410 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 NR2F2P24468 414 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 CDC25BP30305 580 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 TNFSF9P41273 254 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 GUCY2FP51841 1108 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 UBASH3AP57075 661 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 ROR1Q01973 937 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 MCL1Q07820 350 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 KRT31Q15323 416 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 ZBTB41Q5SVQ8 909 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 CWF19L1Q69YN2 538 aaKnown RBP10.13□□□□□ -0.79
ATG3-203ENST00000465980 ZPBP2Q6X784 338 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.13□□□□□ -0.79
ATG3-203ENST00000465980 SLC44A3Q8N4M1 653 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 ITFG1Q8TB96 612 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 ATOH1Q92858 354 aaPredicted RBP10.13□□□□□ -0.79
ATG3-203ENST00000465980 CNOT6LQ96LI5 555 aaKnown RBP10.13□□□□□ -0.79
ATG3-203ENST00000465980 PRRX2Q99811 253 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 XPO4Q9C0E2 1151 aaKnown RBP10.13□□□□□ -0.79
ATG3-203ENST00000465980 AGPAT3Q9NRZ7 376 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 DMAC2Q9NW81 257 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.13□□□□□ -0.79
ATG3-203ENST00000465980 EPS15L1Q9UBC2 864 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
ATG3-203ENST00000465980 DMXL1Q9Y485 3027 aa10.13□□□□□ -0.79
ATG3-203ENST00000465980 WDR27A2RRH5 827 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 TISP43B9A030 160 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 CLIC2O15247 247 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 ADAM23O75077 832 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 PAPLNO95428 1278 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 IL2RAP01589 272 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 PIGRP01833 764 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 PROCP04070 461 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 TPM3P06753 285 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 CLTAP09496 248 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 ELF1P32519 619 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 RPL9P32969 192 aaKnown RBP10.12□□□□□ -0.79
ATG3-203ENST00000465980 COPB1P53618 953 aaKnown RBP10.12□□□□□ -0.79
ATG3-203ENST00000465980 CENPCQ03188 943 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 HTR4Q13639 388 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 NR1I3Q14994 352 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 FILIP1LQ4L180 1135 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 PABPC1LQ4VXU2 614 aaKnown RBP10.12□□□□□ -0.79
ATG3-203ENST00000465980 SLC9A9Q8IVB4 645 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 GPR152Q8TDT2 470 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 FGF14Q92915 247 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 NAP1L5Q96NT1 182 aaPredicted RBP10.12□□□□□ -0.79
ATG3-203ENST00000465980 MSTO1Q9BUK6 570 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 IKZF4Q9H2S9 585 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 CDH7Q9ULB5 785 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 HRH3Q9Y5N1 445 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 BACE2Q9Y5Z0 518 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 NUMBLQ9Y6R0 609 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 KIF26AQ9ULI4 1882 aaPredicted RBP10.12□□□□□ -0.79
ATG3-203ENST00000465980 FANCMQ8IYD8 2048 aa10.12□□□□□ -0.79
ATG3-203ENST00000465980 DENND4CQ5VZ89 1909 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 TTC26A0AVF1 554 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 KRBA1A5PL33 1030 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 LACTBL1A8MY62 500 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 ANKRD63C9JTQ0 380 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 OGTO15294 1046 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 SLC16A3O15427 465 aaKnown RBP10.11□□□□□ -0.79
ATG3-203ENST00000465980 PI15O43692 258 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 LRG1P02750 347 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 TPM2P07951 284 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 THBS1P07996 1170 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 SRFP11831 508 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 CPB1P15086 417 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 NPR3P17342 541 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 HOXA9P31269 272 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 MTIF2P46199 727 aaKnown RBP10.11□□□□□ -0.79
ATG3-203ENST00000465980 PPP2R3AQ06190 1150 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
ATG3-203ENST00000465980 CCDC40Q4G0X9 1142 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 CTXN3Q4LDR2 81 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 SLC8B1Q6J4K2 584 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 SLC39A4Q6P5W5 647 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 PARM1Q6UWI2 310 aa10.11□□□□□ -0.79
ATG3-203ENST00000465980 FRMD5Q7Z6J6 570 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms