RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 PTPRDP23468 1912 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 A0A087X0B3 334 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 K7ELQ4 463 aaPredicted RBP13.71□□□□□ -0.21
SRM-203ENST00000465788 TRIM66O15016 1216 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 WARSP23381 471 aaKnown RBP13.71□□□□□ -0.21
SRM-203ENST00000465788 ACAT1P24752 427 aaKnown RBP13.71□□□□□ -0.21
SRM-203ENST00000465788 GPR15P49685 360 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 ASIC1P78348 528 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 USP4Q13107 963 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 FSTL4Q6MZW2 842 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 PRR23CQ6ZRP0 262 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 HS2ST1Q7LGA3 356 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 CACNA2D4Q7Z3S7 1137 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 ZSWIM2Q8NEG5 633 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 GAB3Q8WWW8 586 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 P2RY13Q9BPV8 354 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 TRIM9Q9C026 710 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 TRPC7Q9HCX4 862 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 DUS2Q9NX74 493 aaKnown RBP13.71□□□□□ -0.21
SRM-203ENST00000465788 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 PCDHGA5Q9Y5G8 931 aa13.71□□□□□ -0.21
SRM-203ENST00000465788 CNOT1A5YKK6 2376 aaKnown RBP13.71□□□□□ -0.22
SRM-203ENST00000465788 CUTAO60888 179 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 TACC1O75410 805 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 TADA3O75528 432 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 RPP40O75818 363 aaKnown RBP13.7□□□□□ -0.22
SRM-203ENST00000465788 NFATC1O95644 943 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 CCDC192P0DO97 292 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 DMWDQ09019 674 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 ZNF77Q15935 545 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 FAM26FQ5R3K3 315 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 DENND5BQ6ZUT9 1274 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 C11orf74Q86VG3 221 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 FAM160A2Q8N612 972 aaPredicted RBP13.7□□□□□ -0.22
SRM-203ENST00000465788 ZNF507Q8TCN5 953 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 CD101Q93033 1021 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 SNX21Q969T3 373 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 MMS19Q96T76 1030 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 FGFBP2Q9BYJ0 223 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 ECT2Q9H8V3 914 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 ARHGAP26Q9UNA1 814 aa13.7□□□□□ -0.22
SRM-203ENST00000465788 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
SRM-203ENST00000465788 RNF40O75150 1001 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 ARSAP15289 507 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 HDCP19113 662 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 TNNI1P19237 187 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 GJA4P35212 333 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 GRIK1P39086 918 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 CDR1P51861 262 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 LIMK1P53667 647 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 PSMD6Q15008 389 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 E2F4Q16254 413 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
SRM-203ENST00000465788 SDHAF4Q5VUM1 108 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 TRIM68Q6AZZ1 485 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 ATL3Q6DD88 541 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 UNC13DQ70J99 1090 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 EPM2AIP1Q7L775 607 aaPredicted RBP13.69□□□□□ -0.22
SRM-203ENST00000465788 SYT13Q7L8C5 426 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 TRAPPC11Q7Z392 1133 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 DDX42Q86XP3 938 aaKnown RBP eCLIP13.69□□□□□ -0.22
SRM-203ENST00000465788 CBWD2Q8IUF1 395 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 C12orf50Q8NA57 414 aaPredicted RBP13.69□□□□□ -0.22
SRM-203ENST00000465788 XXYLT1Q8NBI6 393 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 GOLGA5Q8TBA6 731 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 MYCBPAPQ8TBZ2 947 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 KBTBD7Q8WVZ9 684 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 MYLPFQ96A32 169 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 C8orf48Q96LL4 319 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 CGRRF1Q99675 332 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 C7orf25Q9BPX7 421 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 TTLL2Q9BWV7 592 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 GCNT4Q9P109 453 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.69□□□□□ -0.22
SRM-203ENST00000465788 ACACBO00763 2458 aa13.69□□□□□ -0.22
SRM-203ENST00000465788 ATP8B3O60423 1300 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 CACNA1BQ00975 2339 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 PVALEFA0A1B0GWK0 134 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 AXIN1O15169 862 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 EPN2O95208 641 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 EGFP01133 1207 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 ATICP31939 592 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 GNL1P36915 607 aaPredicted RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 GALK1P51570 392 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 AP3M2P53677 418 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 TNNC1P63316 161 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 NOP14P78316 857 aaKnown RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 CYP27A1Q02318 531 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 SRSF5Q13243 272 aaKnown RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 TRPC3Q13507 836 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 EML3Q32P44 896 aa13.68□□□□□ -0.22
SRM-203ENST00000465788 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
SRM-203ENST00000465788 IL31Q6EBC2 164 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms