RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	TNNC1	P63316	161 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	KIF5A	Q12840	1032 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	PKDCC	Q504Y2	493 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	TIGD5	Q53EQ6	642 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	NOMO2	Q5JPE7	1267 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	RASIP1	Q5U651	963 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	ACAD10	Q6JQN1	1059 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	MFSD5	Q6N075	450 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	CNKSR3	Q6P9H4	555 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	GLB1L	Q6UWU2	654 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	TRIM72	Q6ZMU5	477 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	H2AFV	Q71UI9	128 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	MON1B	Q7L1V2	547 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	KIAA1328	Q86T90	577 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	VPS36	Q86VN1	386 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	PHF13	Q86YI8	300 aa	Predicted RBP	9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	PDCL2	Q8N4E4	241 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	RNF10	Q8N5U6	811 aa	Known RBP	9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	ARHGEF26	Q96DR7	871 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	CYFIP2	Q96F07	1278 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	UROC1	Q96N76	676 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	RTP3	Q9BQQ7	232 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	TSGA10	Q9BZW7	698 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	LHX5	Q9H2C1	402 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	CYTH4	Q9UIA0	394 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	MSRA	Q9UJ68	235 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	PCDHGC5	Q9Y5F6	944 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	CAPN6	Q9Y6Q1	641 aa		9.37	□□□□□ -0.91
UBA3-208	ENST00000465627	NLRC5	Q86WI3	1866 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	EPOP	A6NHQ4	379 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	CASTOR2	A6NHX0	329 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	CYSRT1	A8MQ03	144 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627		F8W810	466 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	NRG2	O14511	850 aa	Predicted RBP	9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	HCRT	O43612	131 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	KRT86	O43790	486 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	IPO7	O95373	1038 aa	Known RBP	9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	LSM8	O95777	96 aa	Known RBP	9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	FTL	P02792	175 aa	Predicted RBP	9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	CYP1A2	P05177	515 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	ITGB1	P05556	798 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	PFKM	P08237	780 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	VDR	P11473	427 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	MYOG	P15173	224 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	MMP8	P22894	467 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	LMO2	P25791	158 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	GATM	P50440	423 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	CNGA2	Q16280	664 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	ARHGAP29	Q52LW3	1261 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	ZNF394	Q53GI3	561 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	KIAA0319	Q5VV43	1072 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	ARHGAP17	Q68EM7	881 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	DCLRE1A	Q6PJP8	1040 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	SYT10	Q6XYQ8	523 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	SLFN11	Q7Z7L1	901 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	NPAS4	Q8IUM7	802 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	LRRC57	Q8N9N7	239 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	RNF169	Q8NCN4	708 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	SPATA18	Q8TC71	538 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	RSPH1	Q8WYR4	309 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	SUSD3	Q96L08	255 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	SENP8	Q96LD8	212 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	NT5C1A	Q9BXI3	368 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	THAP2	Q9H0W7	228 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	KANSL3	Q9P2N6	904 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	KIAA1257	Q9ULG3	409 aa		9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
UBA3-208	ENST00000465627	PTPRD	P23468	1912 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	ABHD14A-ACY1	A0A1B0GW23	586 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	PROB1	E7EW31	1015 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	CYB561D2	O14569	222 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	THAP12	O43422	761 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	KIF4A	O95239	1232 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	CSF2RA	P15509	400 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	RAG1	P15918	1043 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	GGCX	P38435	758 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	RPL34	P49207	117 aa	Known RBP	9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	RABGGTB	P53611	331 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	GSC	P56915	257 aa	Predicted RBP	9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	AMPD2	Q01433	879 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	ORC1	Q13415	861 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	RAB30	Q15771	203 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	TMEM240	Q5SV17	173 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	WSCD1	Q658N2	575 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	DENND1B	Q6P3S1	775 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	LCLAT1	Q6UWP7	414 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	DEFB128	Q7Z7B8	93 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	ADGRF2	Q8IZF7	708 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	MCOLN2	Q8IZK6	566 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	SLC35F6	Q8N357	371 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	C12orf29	Q8N999	325 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	APPL2	Q8NEU8	664 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	RFFL	Q8WZ73	363 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	RABGGTA	Q92696	567 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	ZNF689	Q96CS4	500 aa	Predicted RBP	9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	VCPIP1	Q96JH7	1222 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	MMS19	Q96T76	1030 aa		9.35	□□□□□ -0.91
UBA3-208	ENST00000465627	PKMYT1	Q99640	499 aa		9.35	□□□□□ -0.91

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