RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TOGARAM2Q6ZUX3 1019 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 DNAJB7Q7Z6W7 309 aaPredicted RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 USP37Q86T82 979 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 GPBP1Q86WP2 473 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 MARCH9Q86YJ5 346 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 NAXDQ8IW45 347 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 TTC9BQ8N6N2 239 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 PSMG2Q969U7 264 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 REEP2Q9BRK0 252 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 OXCT2Q9BYC2 517 aaPredicted RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 TASP1Q9H6P5 420 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 CAPN10Q9HC96 672 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 DNAAF2Q9NVR5 837 aaKnown RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 ODF2LQ9ULJ1 636 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 TBX20Q9UMR3 447 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 SLC6A14Q9UN76 642 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 APOBEC2Q9Y235 224 aaKnown RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 MYO18AQ92614 2054 aaKnown RBP10.52□□□□□ -0.73
USP39-212ENST00000465514 TCHHQ07283 1943 aa10.52□□□□□ -0.73
USP39-212ENST00000465514 OR6C75A6NL08 312 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 PPEF2O14830 753 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 HNRNPDLO14979 420 aaKnown RBP10.51□□□□□ -0.73
USP39-212ENST00000465514 OGTO15294 1046 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 XPOTO43592 962 aaKnown RBP10.51□□□□□ -0.73
USP39-212ENST00000465514 FAM189A1O60320 539 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 ADRB2P07550 413 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 SERPINF2P08697 491 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 GJB2P29033 226 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 HOXD12P35452 270 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 DPP6P42658 865 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 SEC13P55735 322 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 GPR17Q13304 367 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 RABEP1Q15276 862 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 DUOXA1Q1HG43 343 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 C2orf27AQ580R0 203 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 LMBRD2Q68DH5 695 aaPredicted RBP10.51□□□□□ -0.73
USP39-212ENST00000465514 OVOS1Q6IE37 1185 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 SLCO6A1Q86UG4 719 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 MYCT1Q8N699 235 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 RIN3Q8TB24 985 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 LRRC15Q8TF66 581 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 KCNN1Q92952 543 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 CD101Q93033 1021 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 EXOC4Q96A65 974 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 FAM212AQ96EL1 285 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 CALML4Q96GE6 196 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 TMX3Q96JJ7 454 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 AK8Q96MA6 479 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 SLC46A2Q9BY10 475 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 CLMPQ9H6B4 373 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 RPF1Q9H9Y2 349 aaKnown RBP10.51□□□□□ -0.73
USP39-212ENST00000465514 POLMQ9NP87 494 aaPredicted RBP10.51□□□□□ -0.73
USP39-212ENST00000465514 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 ASB3Q9Y575 518 aa10.51□□□□□ -0.73
USP39-212ENST00000465514 A0A0B4J269 797 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ANTXRLA6NF34 631 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 PYCARD-AS1I3L0S3 204 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 K7ENM7 598 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ARHGAP33O14559 1287 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 SLC26A4O43511 780 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 FAM13AO94988 1023 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 PIGRP01833 764 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 KRT18P05783 430 aaKnown RBP10.5□□□□□ -0.73
USP39-212ENST00000465514 C7P10643 843 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 HNRNPLP14866 589 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP39-212ENST00000465514 TYMPP19971 482 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 SCP2P22307 547 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ITPKBP27987 946 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 UBA7P41226 1012 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ZNF131P52739 623 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 LILRA4P59901 499 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 MYBPC2Q14324 1141 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 MCM6Q14566 821 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 SPATA1Q5VX52 437 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 JADE1Q6IE81 842 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 CENPPQ6IPU0 288 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ARMCX5Q6P1M9 558 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 CMTM8Q8IZV2 173 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 CPA6Q8N4T0 437 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 CCDC33Q8N5R6 958 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ATAD1Q8NBU5 361 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 CEP76Q8TAP6 659 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 USP33Q8TEY7 942 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 USP13Q92995 863 aaPredicted RBP10.5□□□□□ -0.73
USP39-212ENST00000465514 SENP8Q96LD8 212 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 GCNAQ96QF7 691 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 TSPAN18Q96SJ8 248 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 LPIN3Q9BQK8 851 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 MSTO1Q9BUK6 570 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ZHX3Q9H4I2 956 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 PRORYQ9H606 182 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 PARVGQ9HBI0 331 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 BLOC1S4Q9NUP1 217 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 MMP17Q9ULZ9 603 aa10.5□□□□□ -0.73
USP39-212ENST00000465514 ANAPC1Q9H1A4 1944 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 MTMR11A4FU01 709 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 TRABD2BA6NFA1 517 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 ANKRD63C9JTQ0 380 aa10.49□□□□□ -0.73
USP39-212ENST00000465514 TRAK2O60296 914 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms