RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF638Q14966 1978 aaKnown RBP17.99■□□□□ 0.47
USP39-211ENST00000465282 TCF20Q9UGU0 1960 aaKnown RBP17.99■□□□□ 0.47
USP39-211ENST00000465282 CLUHO75153 1309 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 DENND4CQ5VZ89 1909 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 A0A1B0GTH6 734 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 UCHL3P15374 230 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 ZNF132P52740 706 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 TAF12Q16514 161 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 CCDC142Q17RM4 750 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 SGO2Q562F6 1265 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 PAQR9Q6ZVX9 377 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 FAM35AQ86V20 835 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 SCN4BQ8IWT1 228 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 SLC2A14Q8TDB8 520 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 SHC3Q92529 594 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 KAT5Q92993 513 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 ZNF518BQ9C0D4 1074 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 POMKQ9H5K3 350 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 CSNK1G1Q9HCP0 422 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 DMAP1Q9NPF5 467 aaPredicted RBP17.98■□□□□ 0.47
USP39-211ENST00000465282 ASAH2Q9NR71 780 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 UXTQ9UBK9 157 aaPredicted RBP17.98■□□□□ 0.47
USP39-211ENST00000465282 DNAJC12Q9UKB3 198 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 SIK3Q9Y2K2 1263 aa17.98■□□□□ 0.47
USP39-211ENST00000465282 CLDN5O00501 218 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 RHOP08100 348 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 FAM200BP0CF97 657 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 KRT5P13647 590 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 IL9P15248 144 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 FSHRP23945 695 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 SLC8A3P57103 927 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 ORC1Q13415 861 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 SYCP1Q15431 976 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 DDR2Q16832 855 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 PDZD4Q76G19 769 aaPredicted RBP17.97■□□□□ 0.47
USP39-211ENST00000465282 OTOP3Q7RTS5 596 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 ADHFE1Q8IWW8 467 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 RBBP8NLQ8NC74 664 aaPredicted RBP17.97■□□□□ 0.47
USP39-211ENST00000465282 TRMT2BQ96GJ1 504 aaKnown RBP17.97■□□□□ 0.47
USP39-211ENST00000465282 MYRFLQ96LU7 910 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 LPIN3Q9BQK8 851 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 CORO1BQ9BR76 489 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 LSM14BQ9BX40 385 aaKnown RBP17.97■□□□□ 0.47
USP39-211ENST00000465282 PNPLA8Q9NP80 782 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 FAM49BQ9NUQ9 324 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 COMMD8Q9NX08 183 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 PATJQ8NI35 1801 aa17.97■□□□□ 0.47
USP39-211ENST00000465282 DOCK8Q8NF50 2099 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 A0A1W2PQC6 194 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 F8VP50 259 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 DLL1O00548 723 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 AP1G2O75843 785 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 SOAT2O75908 522 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 NOL4O94818 638 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 CCDC130P13994 396 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 BPIFB4P59827 614 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 FANCCQ00597 558 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 NR1I3Q14994 352 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 CNGA2Q16280 664 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 ARHGAP44Q17R89 818 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 PPP1R26Q5T8A7 1209 aaPredicted RBP17.96■□□□□ 0.47
USP39-211ENST00000465282 GJB7Q6PEY0 223 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 PLCD3Q8N3E9 789 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 ACSF2Q96CM8 615 aaPredicted RBP17.96■□□□□ 0.47
USP39-211ENST00000465282 NAA15Q9BXJ9 866 aaKnown RBP17.96■□□□□ 0.47
USP39-211ENST00000465282 LRRC3Q9BY71 257 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 DUSP16Q9BY84 665 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 STK33Q9BYT3 514 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 UBXN6Q9BZV1 441 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 HCFC1R1Q9NWW0 138 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 ZMYM5Q9UJ78 669 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 A0A0C4DFX4 3053 aa17.96■□□□□ 0.47
USP39-211ENST00000465282 SLC38A8A6NNN8 435 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 SOBPA7XYQ1 873 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 RNF225M0QZC1 329 aaPredicted RBP17.95■□□□□ 0.46
USP39-211ENST00000465282 RTN3O95197 1032 aaPredicted RBP17.95■□□□□ 0.46
USP39-211ENST00000465282 TPM3P06753 285 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 CD19P15391 556 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 NPR3P17342 541 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 UBASH3AP57075 661 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 MEA1Q16626 185 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 DENND5BQ6ZUT9 1274 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 TMC8Q8IU68 726 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 NUP93Q8N1F7 819 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 ANKRD52Q8NB46 1076 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 NEK11Q8NG66 645 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 GIPC2Q8TF65 315 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 PCMTD1Q96MG8 357 aaPredicted RBP17.95■□□□□ 0.46
USP39-211ENST00000465282 GPR88Q9GZN0 384 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 GANQ9H2C0 597 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 KRT82Q9NSB4 513 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 HESX1Q9UBX0 185 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 CDH22Q9UJ99 828 aa17.95■□□□□ 0.46
USP39-211ENST00000465282 MRPS23Q9Y3D9 190 aaKnown RBP17.95■□□□□ 0.46
USP39-211ENST00000465282 MED7O43513 233 aa17.94■□□□□ 0.46
USP39-211ENST00000465282 HMGA1P17096 107 aaKnown RBP17.94■□□□□ 0.46
USP39-211ENST00000465282 ADORA2BP29275 332 aa17.94■□□□□ 0.46
USP39-211ENST00000465282 CDC25CP30307 473 aa17.94■□□□□ 0.46
USP39-211ENST00000465282 PPP3CCP48454 512 aa17.94■□□□□ 0.46
USP39-211ENST00000465282 CDR1P51861 262 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms