RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 TICRRQ7Z2Z1 1910 aa18.93■□□□□ 0.62
COL7A1-205ENST00000465238 COL4A2P08572 1712 aa18.93■□□□□ 0.62
COL7A1-205ENST00000465238 DCHS1Q96JQ0 3298 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 A0A1W2PRU2 124 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 ZNF263O14978 683 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 FGF19O95750 216 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 MARSP56192 900 aaKnown RBP18.92■□□□□ 0.62
COL7A1-205ENST00000465238 CSTF1Q05048 431 aaKnown RBP18.92■□□□□ 0.62
COL7A1-205ENST00000465238 FZD5Q13467 585 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 ZNF667Q5HYK9 610 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 ITIH5Q86UX2 942 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 FAM114A1Q8IWE2 563 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 PDCL2Q8N4E4 241 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 CCDC150Q8NCX0 1101 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 RUBCNQ92622 972 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 PSMG2Q969U7 264 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 SLC35C1Q96A29 364 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 IMPG2Q9BZV3 1241 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 XYLT2Q9H1B5 865 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 THAP9Q9H5L6 903 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 NXF1Q9UBU9 619 aaKnown RBP18.92■□□□□ 0.62
COL7A1-205ENST00000465238 L1RE1Q9UN81 338 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 PCDHGA2Q9Y5H1 932 aa18.92■□□□□ 0.62
COL7A1-205ENST00000465238 GPR179Q6PRD1 2367 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 HEPACAM2A8MVW5 462 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 P4HA1P13674 534 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 ID4P47928 161 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 TUFMP49411 452 aaKnown RBP18.91■□□□□ 0.62
COL7A1-205ENST00000465238 NFKBIBQ15653 356 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 SOWAHAQ2M3V2 549 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 DNAJB7Q7Z6W7 309 aaPredicted RBP18.91■□□□□ 0.62
COL7A1-205ENST00000465238 TRIM59Q8IWR1 403 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 ZNF687Q8N1G0 1237 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 FBXL13Q8NEE6 735 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 OR10T2Q8NGX3 314 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
COL7A1-205ENST00000465238 TAS1R2Q8TE23 839 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 CNOT6LQ96LI5 555 aaKnown RBP18.91■□□□□ 0.62
COL7A1-205ENST00000465238 TMEM209Q96SK2 561 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 VRTNQ9H8Y1 702 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 MAGEC2Q9UBF1 373 aaPredicted RBP18.91■□□□□ 0.62
COL7A1-205ENST00000465238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL7A1-205ENST00000465238 PIAS3Q9Y6X2 628 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 CACNA1AO00555 2505 aa18.91■□□□□ 0.62
COL7A1-205ENST00000465238 LHX1P48742 406 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 MLLT6P55198 1093 aaPredicted RBP18.9■□□□□ 0.62
COL7A1-205ENST00000465238 MYL7Q01449 175 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 SMARCB1Q12824 385 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 C11orf57Q6ZUT1 292 aaPredicted RBP18.9■□□□□ 0.62
COL7A1-205ENST00000465238 YAF2Q8IY57 180 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 ADGRF2Q8IZF7 708 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 TTC9BQ8N6N2 239 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 SUMF1Q8NBK3 374 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 ZBTB44Q8NCP5 570 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 SPATA18Q8TC71 538 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 ATRIPQ8WXE1 791 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 FAM3CQ92520 227 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 HINFPQ9BQA5 517 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 IER2Q9BTL4 223 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 NAT10Q9H0A0 1025 aaKnown RBP18.9■□□□□ 0.62
COL7A1-205ENST00000465238 ZCWPW1Q9H0M4 648 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 ZSCAN32Q9NX65 697 aa18.9■□□□□ 0.62
COL7A1-205ENST00000465238 NDRG2Q9UN36 371 aaKnown RBP18.9■□□□□ 0.62
COL7A1-205ENST00000465238 CEP250Q9BV73 2442 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 NUP210Q8TEM1 1887 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 SYCE3A1L190 88 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 ARNTLO00327 626 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 CHADO15335 359 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 FAM163BP0C2L3 166 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 MTIF2P46199 727 aaKnown RBP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 FMO5P49326 533 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 FCHO2Q0JRZ9 810 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 CETN1Q12798 172 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 MTAPQ13126 283 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 VEPH1Q14D04 833 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 CBWD6Q4V339 395 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 SLC39A12Q504Y0 691 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 CBWD3Q5JTY5 395 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 CBWD5Q5RIA9 395 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 MAMSTRQ6ZN01 415 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 GAREM2Q75VX8 874 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 ERMP1Q7Z2K6 904 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 C2orf15Q8WU43 125 aaKnown RBP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 NELL1Q92832 810 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 MSANTD3Q96H12 275 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 PI4K2AQ9BTU6 479 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 FAM126AQ9BYI3 521 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 CHRDQ9H2X0 955 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 SNX25Q9H3E2 840 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 ATXN3LQ9H3M9 355 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 PRMT8Q9NR22 394 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 RAB20Q9NX57 234 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 DDX43Q9NXZ2 648 aaKnown RBP18.89■□□□□ 0.61
COL7A1-205ENST00000465238 NFE2L3Q9Y4A8 694 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 NCANO14594 1321 aa18.89■□□□□ 0.61
COL7A1-205ENST00000465238 TACC1O75410 805 aa18.88■□□□□ 0.61
COL7A1-205ENST00000465238 SOAT2O75908 522 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms