RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 VSTM1Q6UX27 236 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 CAMKK1Q8N5S9 505 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 GLIS3Q8NEA6 775 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 KBTBD7Q8WVZ9 684 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 ATP2A3Q93084 1043 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 LOXL4Q96JB6 756 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 SPATA17Q96L03 361 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 CEP295NLQ96MC4 621 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 SLC22A12Q96S37 553 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 HSPBP1Q9NZL4 362 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 GCNT4Q9P109 453 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 RNF40O75150 1001 aa24.37■■□□□ 1.49
USP42-205ENST00000465073 RPP40O75818 363 aaKnown RBP24.37■■□□□ 1.49
USP42-205ENST00000465073 LMO2P25791 158 aa24.37■■□□□ 1.49
USP42-205ENST00000465073 GJA4P35212 333 aa24.37■■□□□ 1.49
USP42-205ENST00000465073 PXNP49023 591 aaPredicted RBP24.37■■□□□ 1.49
USP42-205ENST00000465073 CACNA2D4Q7Z3S7 1137 aa24.37■■□□□ 1.49
USP42-205ENST00000465073 WDR49Q8IV35 697 aa24.37■■□□□ 1.49
USP42-205ENST00000465073 HPS3Q969F9 1004 aa24.37■■□□□ 1.49
USP42-205ENST00000465073 TRIM9Q9C026 710 aa24.37■■□□□ 1.49
USP42-205ENST00000465073 SPTLC2O15270 562 aa24.36■■□□□ 1.49
USP42-205ENST00000465073 EIF3DO15371 548 aaKnown RBP eCLIP24.36■■□□□ 1.49
USP42-205ENST00000465073 WARSP23381 471 aaKnown RBP24.36■■□□□ 1.49
USP42-205ENST00000465073 HOXD13P35453 343 aa24.36■■□□□ 1.49
USP42-205ENST00000465073 IFNAR2P48551 515 aa24.36■■□□□ 1.49
USP42-205ENST00000465073 PDE6CP51160 858 aa24.36■■□□□ 1.49
USP42-205ENST00000465073 USP4Q13107 963 aa24.36■■□□□ 1.49
USP42-205ENST00000465073 E2F4Q16254 413 aa24.36■■□□□ 1.49
USP42-205ENST00000465073 ARL14EPQ8N8R7 260 aaPredicted RBP24.36■■□□□ 1.49
USP42-205ENST00000465073 ZNF638Q14966 1978 aaKnown RBP24.35■■□□□ 1.49
USP42-205ENST00000465073 C2orf78A6NCI8 922 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 PPP6R2O75170 966 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 AKAP3O75969 853 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 TCF3P15923 654 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 HDCP19113 662 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 PSMC1P62191 440 aaKnown RBP24.35■■□□□ 1.49
USP42-205ENST00000465073 NR1H3Q13133 447 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 KCNB1Q14721 858 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 CNNM4Q6P4Q7 775 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 TTC16Q8NEE8 873 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 ZNF507Q8TCN5 953 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 SH3RF2Q8TEC5 729 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 MYLPFQ96A32 169 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 MMS19Q96T76 1030 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 CRTAC1Q9NQ79 661 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 FOXD4L1Q9NU39 408 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 WNT6Q9Y6F9 365 aa24.35■■□□□ 1.49
USP42-205ENST00000465073 AXIN1O15169 862 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 PDGFRBP09619 1106 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 PFKLP17858 780 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 BDNFP23560 247 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 GRIK1P39086 918 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 RAP1GAPP47736 663 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 ASIC1P78348 528 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 EML3Q32P44 896 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 EPM2AIP1Q7L775 607 aaPredicted RBP24.34■■□□□ 1.49
USP42-205ENST00000465073 TRAPPC11Q7Z392 1133 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 IQUBQ8NA54 791 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 CD101Q93033 1021 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 ZNF396Q96N95 335 aaPredicted RBP24.34■■□□□ 1.49
USP42-205ENST00000465073 EHD2Q9NZN4 543 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 ARHGAP26Q9UNA1 814 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 OBSL1O75147 1896 aa24.34■■□□□ 1.49
USP42-205ENST00000465073 TPRP12270 2363 aaKnown RBP24.34■■□□□ 1.49
USP42-205ENST00000465073 GDF9O60383 454 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 FAM163BP0C2L3 166 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 CCDC192P0DO97 292 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 ANXA13P27216 316 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 CYP27A1Q02318 531 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 SNRNP35Q16560 246 aaKnown RBP24.33■■□□□ 1.49
USP42-205ENST00000465073 NAIF1Q69YI7 327 aaPredicted RBP24.33■■□□□ 1.49
USP42-205ENST00000465073 KBTBD6Q86V97 674 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 MYCBPAPQ8TBZ2 947 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 DHX58Q96C10 678 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 ARRDC1-AS1Q9H2J1 176 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 TRPM5Q9NZQ8 1165 aa24.33■■□□□ 1.49
USP42-205ENST00000465073 TFIP11Q9UBB9 837 aaKnown RBP24.33■■□□□ 1.49
USP42-205ENST00000465073 EPN2O95208 641 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 GNL1P36915 607 aaPredicted RBP24.32■■□□□ 1.48
USP42-205ENST00000465073 SNRPFP62306 86 aaKnown RBP24.32■■□□□ 1.48
USP42-205ENST00000465073 FAM26FQ5R3K3 315 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 DENND5BQ6ZUT9 1274 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 SYT13Q7L8C5 426 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 RDH13Q8NBN7 331 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 CCDC26Q8TAB7 109 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 FNBP1Q96RU3 617 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 SNX25Q9H3E2 840 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 AGPAT3Q9NRZ7 376 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 K7ELQ4 463 aaPredicted RBP24.32■■□□□ 1.48
USP42-205ENST00000465073 TRIM66O15016 1216 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 TGFB1I1O43294 461 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 TACC1O75410 805 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 ZNF806P0C7X5 589 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 DLATP10515 647 aaKnown RBP24.32■■□□□ 1.48
USP42-205ENST00000465073 PPP3CCP48454 512 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 PSMD6Q15008 389 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 PPM1JQ5JR12 505 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 RPLP0P6Q8NHW5 317 aa24.32■■□□□ 1.48
USP42-205ENST00000465073 DDX1Q92499 740 aaKnown RBP24.32■■□□□ 1.48
USP42-205ENST00000465073 ACDQ96AP0 544 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms