RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SIT1Q9Y3P8 196 aa17.3■□□□□ 0.36
COL1A1-202ENST00000463440 ATP8B3O60423 1300 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 KANSL1LA0AUZ9 987 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 TRIM21P19474 475 aaKnown RBP17.29■□□□□ 0.36
COL1A1-202ENST00000463440 CCNE1P24864 410 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 AVPR1AP37288 418 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 NHLH1Q02575 133 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 TCF15Q12870 199 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 KRT39Q6A163 491 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 SPOPLQ6IQ16 392 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 GPIHBP1Q8IV16 184 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 ZC3H3Q8IXZ2 948 aaKnown RBP17.29■□□□□ 0.36
COL1A1-202ENST00000463440 CMTM8Q8IZV2 173 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 MAB21L3Q8N8X9 362 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 TAS1R2Q8TE23 839 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 RSPRY1Q96DX4 576 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 C8orf48Q96LL4 319 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 SLC46A2Q9BY10 475 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 SDCBP2Q9H190 292 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 TRPV5Q9NQA5 729 aa17.29■□□□□ 0.36
COL1A1-202ENST00000463440 CHADO15335 359 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 MXI1P50539 228 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 PMS1P54277 932 aaKnown RBP17.28■□□□□ 0.36
COL1A1-202ENST00000463440 NOP14P78316 857 aaKnown RBP17.28■□□□□ 0.36
COL1A1-202ENST00000463440 FCHO2Q0JRZ9 810 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 TCERG1LQ5VWI1 586 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 TXNDC8Q6A555 127 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 TPRG1Q6ZUI0 275 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 DENND5BQ6ZUT9 1274 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 MON1AQ86VX9 555 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 UNC93AQ86WB7 457 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 CCDC105Q8IYK2 499 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 CELF5Q8N6W0 485 aaKnown RBP17.28■□□□□ 0.36
COL1A1-202ENST00000463440 PJA1Q8NG27 643 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 MED10Q9BTT4 135 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 DDX23Q9BUQ8 820 aaKnown RBP17.28■□□□□ 0.36
COL1A1-202ENST00000463440 B3GNT5Q9BYG0 378 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 FOXQ1Q9C009 403 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 ZNF518BQ9C0D4 1074 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 CYP3A43Q9HB55 503 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 HEBP1Q9NRV9 189 aa17.28■□□□□ 0.36
COL1A1-202ENST00000463440 MRPS17Q9Y2R5 130 aaKnown RBP17.28■□□□□ 0.36
COL1A1-202ENST00000463440 NUP210Q8TEM1 1887 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-202ENST00000463440 PTPRDP23468 1912 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 NCANO14594 1321 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 F8VP50 259 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 CLDN5O00501 218 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 PRAMEF12O95522 483 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 ASPAP45381 313 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 NDST1P52848 882 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 MORC3Q14149 939 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 UBXN2BQ14CS0 331 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-202ENST00000463440 ZNF852Q6ZMS4 543 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 ACOT1Q86TX2 421 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 DTWD2Q8NBA8 298 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 FBXL13Q8NEE6 735 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 BPIFB1Q8TDL5 484 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 CSGALNACT1Q8TDX6 532 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 NELL2Q99435 816 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 BCO2Q9BYV7 579 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 OSBPL6Q9BZF3 934 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 DNAI2Q9GZS0 605 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 NIF3L1Q9GZT8 377 aa17.27■□□□□ 0.36
COL1A1-202ENST00000463440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.27■□□□□ 0.36
COL1A1-202ENST00000463440 THG1LQ9NWX6 298 aaKnown RBP17.27■□□□□ 0.36
COL1A1-202ENST00000463440 ARMCX3Q9UH62 379 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-202ENST00000463440 DENND4CQ5VZ89 1909 aa17.27■□□□□ 0.35
COL1A1-202ENST00000463440 BICDL2A1A5D9 508 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 BIN1O00499 593 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 MAN2B1O00754 1011 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 TADA3O75528 432 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 DCNP07585 359 aaKnown RBP17.26■□□□□ 0.35
COL1A1-202ENST00000463440 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
COL1A1-202ENST00000463440 PLCB2Q00722 1185 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 KLHL10Q6JEL2 608 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 FAM35AQ86V20 835 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 CRYBG2Q8N1P7 616 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 CEP63Q96MT8 703 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 SMG9Q9H0W8 520 aaKnown RBP17.26■□□□□ 0.35
COL1A1-202ENST00000463440 KIF9Q9HAQ2 790 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 APOBEC3GQ9HC16 384 aaKnown RBP17.26■□□□□ 0.35
COL1A1-202ENST00000463440 METTL14Q9HCE5 456 aaKnown RBP17.26■□□□□ 0.35
COL1A1-202ENST00000463440 TRPC7Q9HCX4 862 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 LTB4R2Q9NPC1 389 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 TDP1Q9NUW8 608 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 RAB20Q9NX57 234 aa17.26■□□□□ 0.35
COL1A1-202ENST00000463440 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 FAM170BA6NMN3 283 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 H0Y858 1186 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 NCAM2O15394 837 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 GLULP15104 373 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 CD72P21854 359 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 PPP3CCP48454 512 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 CACNA2D1P54289 1103 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 INCA1Q0VD86 236 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 WDR44Q5JSH3 913 aa17.25■□□□□ 0.35
COL1A1-202ENST00000463440 NELFBQ8WX92 580 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms