RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CDKN2BP42772 138 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 LMAN1P49257 510 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 VPS41P49754 854 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 ZNF844Q08AG5 666 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 KCNA10Q16322 511 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 CEP85LQ5SZL2 805 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 OR6B2Q6IFH4 312 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 ZNF771Q7L3S4 317 aaPredicted RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 GSTCDQ8NEC7 633 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 FNIP1Q8TF40 1166 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 ART4Q93070 314 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 B3GNT5Q9BYG0 378 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 WDR35Q9P2L0 1181 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 KIAA1257Q9ULG3 409 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 hCG_1818297A0A087WSY0 165 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 RPS6KA5O75582 802 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 CD4P01730 458 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 PDE4CQ08493 712 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 CCNG2Q16589 344 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 C15orf59Q2T9L4 293 aaPredicted RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 GLIPR1L2Q4G1C9 344 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 DNAJC21Q5F1R6 531 aaKnown RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 SCUBE3Q8IX30 993 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 MAIP1Q8WWC4 291 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 RUNDC3BQ96NL0 473 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 PEBP4Q96S96 227 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 GPBP1L1Q9HC44 474 aaPredicted RBP13.49□□□□□ -0.25
VAPB-203ENST00000463370 DNPEPQ9ULA0 475 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 TRPV2Q9Y5S1 764 aa13.49□□□□□ -0.25
VAPB-203ENST00000463370 GOLGA8KD6RF30 607 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 KPNA6O60684 536 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 MIPP30301 263 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 MLH1P40692 756 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 LILRA4P59901 499 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 OSTM1Q86WC4 334 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 TTC39CQ8N584 583 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 ATL2Q8NHH9 583 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 SLC35F5Q8WV83 523 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 PPP1R10Q96QC0 940 aaKnown RBP13.48□□□□□ -0.25
VAPB-203ENST00000463370 FAM124BQ9H5Z6 455 aaPredicted RBP13.48□□□□□ -0.25
VAPB-203ENST00000463370 ASIC3Q9UHC3 531 aa13.48□□□□□ -0.25
VAPB-203ENST00000463370 C2CD4BA6NLJ0 364 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 SHBGP04278 402 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 ADORA2BP29275 332 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 GNL1P36915 607 aaPredicted RBP13.47□□□□□ -0.25
VAPB-203ENST00000463370 MGAT3Q09327 533 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 PTK6Q13882 451 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 CCSAPQ6IQ19 270 aaPredicted RBP13.47□□□□□ -0.25
VAPB-203ENST00000463370 OLFML1Q6UWY5 402 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 CYP4V2Q6ZWL3 525 aaPredicted RBP13.47□□□□□ -0.25
VAPB-203ENST00000463370 IPO4Q8TEX9 1081 aaKnown RBP13.47□□□□□ -0.25
VAPB-203ENST00000463370 CLEC4CQ8WTT0 213 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 RXFP2Q8WXD0 754 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
VAPB-203ENST00000463370 PWWP2AQ96N64 755 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 SEMA4AQ9H3S1 761 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 SPC25Q9HBM1 224 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 AAASQ9NRG9 546 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 FAM105AQ9NUU6 356 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 MIOSQ9NXC5 875 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 GDAP2Q9NXN4 497 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 RALGAPA2Q2PPJ7 1873 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 ERICH4A6NGS2 130 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 M0QZ92 97 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 PAPSS1O43252 624 aaPredicted RBP13.47□□□□□ -0.25
VAPB-203ENST00000463370 LIASO43766 372 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 ATP2C2O75185 946 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
VAPB-203ENST00000463370 CHKAP35790 457 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 TAF6P49848 677 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 DYNLT1P63172 113 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 CDO1Q16878 200 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 TFDP3Q5H9I0 405 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 LIMS2Q7Z4I7 341 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 SMC1BQ8NDV3 1235 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 FAM76AQ8TAV0 307 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 HHIPL1Q96JK4 782 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 GAD1Q99259 594 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 SLC4A5Q9BY07 1137 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 MIS12Q9H081 205 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 SCN10AQ9Y5Y9 1956 aa13.47□□□□□ -0.25
VAPB-203ENST00000463370 MGEA5O60502 916 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ZSCAN5DPP0CG00 497 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ETS1P14921 441 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 PDGFRAP16234 1089 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 IBSPP21815 317 aaPredicted RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 THPOP40225 353 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 ZNF143P52747 638 aaPredicted RBP13.46□□□□□ -0.25
VAPB-203ENST00000463370 PMS2P54278 862 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 NKX3-2P78367 333 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 LRIG3Q6UXM1 1119 aa13.46□□□□□ -0.25
VAPB-203ENST00000463370 UNC93AQ86WB7 457 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms