RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 PACSIN2Q9UNF0 486 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 NRCAMQ92823 1304 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 CAPN9O14815 690 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 HBP1O60381 514 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 MUTP22033 750 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 MLH1P40692 756 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 PRKCEQ02156 737 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 DCTN2Q13561 401 aaKnown RBP12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 LRRC26Q2I0M4 334 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 KRT79Q5XKE5 535 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 ANKRD33Q7Z3H0 272 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 DYDC2Q96IM9 177 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 FAM81BQ96LP2 452 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 TOX2Q96NM4 488 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 BTBD10Q9BSF8 475 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 RNPEPQ9H4A4 650 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 FAIMQ9NVQ4 179 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 RHBDL2Q9NX52 303 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 GTF2IRD1Q9UHL9 959 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 NENFQ9UMX5 172 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 CHMP2BQ9UQN3 213 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 ATP11BQ9Y2G3 1177 aa12.06□□□□□ -0.48
TRAPPC3-205ENST00000462715 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 A0A087X0T9 212 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 C17orf102A2RUQ5 167 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 TMEM110-MUSTN1A8MSY1 372 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 C2CD2LO14523 706 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 PQBP1O60828 265 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 PHF2O75151 1096 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 FAM228BP0C875 321 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 TARSP26639 723 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 MARSP56192 900 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 PLCB3Q01970 1234 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 CYP4A11Q02928 519 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 KLHL30Q0D2K2 578 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 UGCGQ16739 394 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 PDCD4Q53EL6 469 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 XKR3Q5GH77 459 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 TMEM110Q86TL2 294 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 NT5DC3Q86UY8 548 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 JAMLQ86YT9 394 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 MAP7D3Q8IWC1 876 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 TPH2Q8IWU9 490 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 EPS8L3Q8TE67 593 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 TSG101Q99816 390 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 TRIM9Q9C026 710 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 NRDE2Q9H7Z3 1164 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 GRHL1Q9NZI5 618 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 NOD1Q9Y239 953 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 COL1A2P08123 1366 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 H0Y3Z8 333 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 ITGA4P13612 1032 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 RPA1P27694 616 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 UBA7P41226 1012 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 PRKCIP41743 596 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 CFAP157Q5JU67 520 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 C4orf19Q8IY42 314 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 SNX29Q8TEQ0 813 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 SPIRE2Q8WWL2 714 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 SEMA6BQ9H3T3 888 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 KRT82Q9NSB4 513 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 ETNK2Q9NVF9 386 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 PLK2Q9NYY3 685 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 THEGQ9P2T0 379 aa12.05□□□□□ -0.48
TRAPPC3-205ENST00000462715 KDM3AQ9Y4C1 1321 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 TMEM247A6NEH6 219 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 SLC26A4O43511 780 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 ZNF862O60290 1169 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 NOL4O94818 638 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 SLITRK3O94933 977 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 ALDH2P05091 517 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 RGS19P49795 217 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 RAP1GDS1P52306 607 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 PLOD1Q02809 727 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 TLE2Q04725 743 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 PRPF4BQ13523 1007 aaKnown RBP12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 CTTNQ14247 550 aaKnown RBP12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 GRIK4Q16099 956 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 ZNF484Q5JVG2 852 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 FAM91A1Q658Y4 838 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 NUP93Q8N1F7 819 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 ATP11CQ8NB49 1132 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 ART4Q93070 314 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 MPP4Q96JB8 637 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 ECSITQ9BQ95 431 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 SEMA4AQ9H3S1 761 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 GPAMQ9HCL2 828 aa12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 SEPT9Q9UHD8 586 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-205ENST00000462715 CBFA2T3O75081 653 aa12.03□□□□□ -0.48
TRAPPC3-205ENST00000462715 TBX10O75333 385 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms