RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NAIF1Q69YI7 327 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 ITIH5Q86UX2 942 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 CD302Q8IX05 232 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 EFCAB13Q8IY85 973 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 CEP57L1Q8IYX8 460 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 SYNPOQ8N3V7 929 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 KIAA0895Q8NCT3 520 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 ZNF507Q8TCN5 953 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 SCFD1Q8WVM8 642 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 TSPAN18Q96SJ8 248 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 PYM1Q9BRP8 204 aaKnown RBP8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 LRRC27Q9C0I9 530 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 TMLHEQ9NVH6 421 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 POLR3BQ9NW08 1133 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 USP25Q9UHP3 1055 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 AGO2Q9UKV8 859 aaKnown RBP8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 DERAQ9Y315 318 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 C2CD2Q9Y426 696 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 PCNX2A6NKB5 2137 aa8.53□□□□□ -1.04
CDC42BPA-210ENST00000462553 SMG1Q96Q15 3661 aaKnown RBP8.52□□□□□ -1.04
CDC42BPA-210ENST00000462553 MYH10P35580 1976 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 PVALEFA0A1B0GWK0 134 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 DPYSL4O14531 572 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 TM4SF5O14894 197 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 TGFB1I1O43294 461 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 F11P03951 625 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 HAPLN1P10915 354 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 ARSAP15289 507 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 RAP1GAPP47736 663 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 PXNP49023 591 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 GPR15P49685 360 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 LIMK1P53667 647 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 DPYDQ12882 1025 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 SF3A2Q15428 464 aaKnown RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 CCDC6Q16204 474 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 ST3GAL2Q16842 350 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 CCDC142Q17RM4 750 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 MGAT5BQ3V5L5 792 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 ARHGAP15Q53QZ3 475 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 WSCD1Q658N2 575 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 SCARA3Q6AZY7 606 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 TRIM68Q6AZZ1 485 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 SLFN12LQ6IEE8 588 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 KBTBD6Q86V97 674 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 BRSK2Q8IWQ3 736 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 CMTM8Q8IZV2 173 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 FMR1NBQ8N0W7 255 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 GIPC2Q8TF65 315 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 GAB3Q8WWW8 586 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 POMGNT1Q8WZA1 660 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 EZH1Q92800 747 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 USP13Q92995 863 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 RNF25Q96BH1 459 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 SAAL1Q96ER3 474 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 FAM84AQ96KN4 292 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 PKMYT1Q99640 499 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 EXOC7Q9UPT5 735 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 ADAMTS9Q9P2N4 1935 aa8.52□□□□□ -1.05
CDC42BPA-210ENST00000462553 CCDC163A0A0D9SF12 145 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 CYB561D2O14569 222 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 TRDMT1O14717 391 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 RPP40O75818 363 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZNF202O95125 648 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 EGFP01133 1207 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 PAX3P23760 479 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 PMLP29590 882 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 TUFMP49411 452 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 TAF6P49848 677 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 NLRP12P59046 1061 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 POU5F1Q01860 360 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 STK4Q13043 487 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 USP4Q13107 963 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 RUNX3Q13761 415 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 VEPH1Q14D04 833 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 POSTNQ15063 836 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 KMT5BQ4FZB7 885 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 ARMCX5Q6P1M9 558 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 KRBA2Q6ZNG9 492 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 CEP68Q76N32 757 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 MAB21L3Q8N8X9 362 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 ENGASEQ8NFI3 743 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 CXorf38Q8TB03 319 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 SPPL2BQ8TCT7 592 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 C2orf15Q8WU43 125 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 GCNAQ96QF7 691 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 FAM213AQ9BRX8 229 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 ARRDC1-AS1Q9H2J1 176 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 SMOC1Q9H4F8 434 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 EBF3Q9H4W6 596 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 PCIF1Q9H4Z3 704 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 ASB7Q9H672 318 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 TMEM206Q9H813 350 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 FBRSL1Q9HCM7 1045 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 SLC39A2Q9NP94 309 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 AGPAT3Q9NRZ7 376 aa8.51□□□□□ -1.05
CDC42BPA-210ENST00000462553 GKN1Q9NS71 199 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms