RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 SYNPOQ8N3V7 929 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 MYCBPAPQ8TBZ2 947 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 ATP2A3Q93084 1043 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 MYLPFQ96A32 169 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 TRMT2BQ96GJ1 504 aaKnown RBP9.46□□□□□ -0.9
LDB1-203ENST00000461873 ZFYVE19Q96K21 471 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 ELOVL4Q9GZR5 314 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 SMG9Q9H0W8 520 aaKnown RBP9.46□□□□□ -0.9
LDB1-203ENST00000461873 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 TMLHEQ9NVH6 421 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 RMND1Q9NWS8 449 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 DUS2Q9NX74 493 aaKnown RBP9.46□□□□□ -0.9
LDB1-203ENST00000461873 GTSE1Q9NYZ3 720 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 SIX4Q9UIU6 781 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 SLC8A2Q9UPR5 921 aa9.46□□□□□ -0.9
LDB1-203ENST00000461873 PDXKO00764 312 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 TACC1O75410 805 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 NOL4O94818 638 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 RTN3O95197 1032 aaPredicted RBP9.45□□□□□ -0.9
LDB1-203ENST00000461873 CST3P01034 146 aaPredicted RBP9.45□□□□□ -0.9
LDB1-203ENST00000461873 F11P03951 625 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 NR3C1P04150 777 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 PFKLP17858 780 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 PTPN1P18031 435 aaKnown RBP9.45□□□□□ -0.9
LDB1-203ENST00000461873 SDHBP21912 280 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 LMO2P25791 158 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 CTHP32929 405 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 PIK3CAP42336 1068 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 WNT7BP56706 349 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 MYL6P60660 151 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 NUCB2P80303 420 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 NCOA4Q13772 614 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 ZNF268Q14587 947 aaPredicted RBP9.45□□□□□ -0.9
LDB1-203ENST00000461873 MTF1Q14872 753 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 FAM171BQ6P995 826 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 TSSK4Q6SA08 328 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 PRR23BQ6ZRT6 265 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 CEP68Q76N32 757 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 SPEM1Q8N4L4 309 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 PDZD8Q8NEN9 1154 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 PCED1BQ96HM7 432 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 SPATA17Q96L03 361 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 TSG101Q99816 390 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 EBF3Q9H4W6 596 aa9.45□□□□□ -0.9
LDB1-203ENST00000461873 MYH10P35580 1976 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 SLC9A3R1O14745 358 aaPredicted RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 ACTN4O43707 911 aaKnown RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 STX10O60499 249 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 ATP2C2O75185 946 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 SMC2O95347 1197 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 PRAMEF12O95522 483 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 NFATC1O95644 943 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 STAU1O95793 577 aaKnown RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 HMGA1P17096 107 aaKnown RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 DRD1P21728 446 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 NR2F2P24468 414 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 CNR2P34972 360 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 HOXD13P35453 343 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 ID4P47928 161 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 SOX9P48436 509 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 GOLGA8FQ08AF8 430 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 GOLGA8DPQ0D2H9 430 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 STK4Q13043 487 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 STIM1Q13586 685 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 SCARA5Q6ZMJ2 495 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 NUDT18Q6ZVK8 323 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 INTS8Q75QN2 995 aaKnown RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 OSTM1Q86WC4 334 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 DDX42Q86XP3 938 aaKnown RBP eCLIP9.44□□□□□ -0.9
LDB1-203ENST00000461873 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 KIAA2013Q8IYS2 634 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 NUP93Q8N1F7 819 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 B3GALNT2Q8NCR0 500 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 TAF4BQ92750 862 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 USP13Q92995 863 aaPredicted RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 MYRFLQ96LU7 910 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 MRPL45Q9BRJ2 306 aaKnown RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 GTPBP4Q9BZE4 634 aaKnown RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 MMRN2Q9H8L6 949 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 CACNA1IQ9P0X4 2223 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
LDB1-203ENST00000461873 USP34Q70CQ2 3546 aa9.44□□□□□ -0.9
LDB1-203ENST00000461873 CACNA1HO95180 2353 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 PTPRJQ12913 1337 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 A0A1W2PQ27 194 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 A0A1W2PQ64 194 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 A0A1W2PQD8 194 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 F8VP50 259 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 IKBKBO14920 756 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 CETN3O15182 167 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 ZNF202O95125 648 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 CCDC192P0DO97 292 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 EPB41P11171 864 aaKnown RBP9.43□□□□□ -0.9
LDB1-203ENST00000461873 MBL2P11226 248 aaPredicted RBP9.43□□□□□ -0.9
LDB1-203ENST00000461873 CHRNB1P11230 501 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 YWHAQP27348 245 aa9.43□□□□□ -0.9
LDB1-203ENST00000461873 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
LDB1-203ENST00000461873 CASP4P49662 377 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms