RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 NETO1Q8TDF5 533 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 MSANTD3Q96H12 275 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 PGLYRP2Q96PD5 576 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 ERGIC2Q96RQ1 377 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 PCIF1Q9H4Z3 704 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 ANKFY1Q9P2R3 1169 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 TUBGCP4Q9UGJ1 667 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 YIPF1Q9Y548 306 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 FRYLO94915 3013 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 COL4A2P08572 1712 aa16.62■□□□□ 0.25
SF3A3-203ENST00000461869 CEP250Q9BV73 2442 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.61■□□□□ 0.25
SF3A3-203ENST00000461869 A0A1W2PRU2 124 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 CHURC1-FNTBB4DL54 471 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 TISP43B9A030 160 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 SLC30A4O14863 429 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 CLDN3O15551 220 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 TEX33O43247 280 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 NRDCO43847 1150 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 EXTL3O43909 919 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 STX10O60499 249 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 LRP3O75074 770 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 ADRB1P08588 477 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 MATR3P43243 847 aaKnown RBP eCLIP16.61■□□□□ 0.25
SF3A3-203ENST00000461869 FNTBP49356 437 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 DMWDQ09019 674 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 LRRC32Q14392 662 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 SNRNP35Q16560 246 aaKnown RBP16.61■□□□□ 0.25
SF3A3-203ENST00000461869 TCERG1LQ5VWI1 586 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 BEST2Q8NFU1 509 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 RSPRY1Q96DX4 576 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 C8orf33Q9H7E9 229 aaPredicted RBP16.61■□□□□ 0.25
SF3A3-203ENST00000461869 SEMA4GQ9NTN9 838 aa16.61■□□□□ 0.25
SF3A3-203ENST00000461869 RBM12Q9NTZ6 932 aaKnown RBP16.61■□□□□ 0.25
SF3A3-203ENST00000461869 AGO2Q9UKV8 859 aaKnown RBP16.61■□□□□ 0.25
SF3A3-203ENST00000461869 TIMM13Q9Y5L4 95 aaPredicted RBP16.61■□□□□ 0.25
SF3A3-203ENST00000461869 TICRRQ7Z2Z1 1910 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 A0A0B4J269 797 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 ZNF233A6NK53 670 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 SLC38A8A6NNN8 435 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 M0QZQ0 153 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 CHADO15335 359 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 OAZ2O95190 189 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 OR4Q2P0C623 313 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 CNR2P34972 360 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 SOX9P48436 509 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 EPHB3P54753 998 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 KCNH2Q12809 1159 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 SRSF5Q13243 272 aaKnown RBP16.6■□□□□ 0.25
SF3A3-203ENST00000461869 PLD1Q13393 1074 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.25
SF3A3-203ENST00000461869 KYAT1Q16773 422 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 PPM1JQ5JR12 505 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 GPIHBP1Q8IV16 184 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 MSTO1Q9BUK6 570 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 NUP58Q9BVL2 599 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 LRRC3Q9BY71 257 aa16.6■□□□□ 0.25
SF3A3-203ENST00000461869 OXCT2Q9BYC2 517 aaPredicted RBP16.6■□□□□ 0.25
SF3A3-203ENST00000461869 GTPBP10A4D1E9 387 aaKnown RBP16.59■□□□□ 0.25
SF3A3-203ENST00000461869 VNN2O95498 520 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 ALDH1A3P47895 512 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 VAMP7P51809 220 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 MCL1Q07820 350 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 FCHO2Q0JRZ9 810 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 CETN1Q12798 172 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 DUSP4Q13115 394 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 CSRP2Q16527 193 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 HEATR6Q6AI08 1181 aaKnown RBP16.59■□□□□ 0.25
SF3A3-203ENST00000461869 PRR23CQ6ZRP0 262 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 CCDC186Q7Z3E2 898 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 LONP2Q86WA8 852 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 TMC8Q8IU68 726 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 ARID3BQ8IVW6 561 aaPredicted RBP16.59■□□□□ 0.25
SF3A3-203ENST00000461869 TMEM130Q8N3G9 435 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 TMC2Q8TDI7 906 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 SLC35C1Q96A29 364 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 SAAL1Q96ER3 474 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 PCMTD1Q96MG8 357 aaPredicted RBP16.59■□□□□ 0.25
SF3A3-203ENST00000461869 CRISPLD1Q9H336 500 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 PLEKHA5Q9HAU0 1116 aa16.59■□□□□ 0.25
SF3A3-203ENST00000461869 NCOR2Q9Y618 2525 aa16.58■□□□□ 0.25
SF3A3-203ENST00000461869 OR6C75A6NL08 312 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 SPECC1L-ADORA2AF8WAN1 911 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 K7ESF4 209 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 OGTO15294 1046 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 P4HA2O15460 535 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 PAPSS2O95340 614 aaPredicted RBP16.58■□□□□ 0.24
SF3A3-203ENST00000461869 CXCL8P10145 99 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 LRPAP1P30533 357 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 MCCD1P59942 119 aaPredicted RBP16.58■□□□□ 0.24
SF3A3-203ENST00000461869 TBX2Q13207 712 aaPredicted RBP16.58■□□□□ 0.24
SF3A3-203ENST00000461869 SYCP1Q15431 976 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 FIGNQ5HY92 759 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 DGKKQ5KSL6 1271 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 STXBP5Q5T5C0 1151 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 DSTYKQ6XUX3 929 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 Q6ZS52 159 aa16.58■□□□□ 0.24
SF3A3-203ENST00000461869 RALGPS2Q86X27 583 aaPredicted RBP16.58■□□□□ 0.24
SF3A3-203ENST00000461869 CNGA4Q8IV77 575 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms