RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CRTAC1Q9NQ79 661 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 TDP1Q9NUW8 608 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 ZSCAN32Q9NX65 697 aa9.8□□□□□ -0.84
BRCA1-207ENST00000461798 MAGEC2Q9UBF1 373 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-207ENST00000461798 CIZ1Q9ULV3 898 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-207ENST00000461798 NDRG2Q9UN36 371 aaKnown RBP9.8□□□□□ -0.84
BRCA1-207ENST00000461798 USP34Q70CQ2 3546 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 GPR179Q6PRD1 2367 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 A0A1B0GVL5 298 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 SPECC1L-ADORA2AF8WAN1 911 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 PDXKO00764 312 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 HCRTO43612 131 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 EXOC3O60645 756 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 KINO60870 393 aaKnown RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 TADA3O75528 432 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 PAPSS2O95340 614 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 DLATP10515 647 aaKnown RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 PFKFB1P16118 471 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 PFKLP17858 780 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 CTHP32929 405 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 GNL1P36915 607 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 AVPR1AP37288 418 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 CCR3P51677 355 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 KPNA1P52294 538 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 KRT85P78386 507 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 LRRC32Q14392 662 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 GAS6Q14393 721 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 CCDC142Q17RM4 750 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 ITPRIPL2Q3MIP1 535 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 SDHAF4Q5VUM1 108 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 TXNDC8Q6A555 127 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 GRAMD1CQ8IYS0 662 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 SPEM1Q8N4L4 309 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 MAB21L3Q8N8X9 362 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 PLEKHO2Q8TD55 490 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 PARD3BQ8TEW8 1205 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 ATRIPQ8WXE1 791 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 ZFYVE19Q96K21 471 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 SPATA32Q96LK8 384 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 C8orf48Q96LL4 319 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 MRPL45Q9BRJ2 306 aaKnown RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 SMG9Q9H0W8 520 aaKnown RBP9.79□□□□□ -0.84
BRCA1-207ENST00000461798 KCTD10Q9H3F6 313 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 GKN1Q9NS71 199 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 GTSE1Q9NYZ3 720 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 GCNT4Q9P109 453 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 NME7Q9Y5B8 376 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 OTOGLQ3ZCN5 2332 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 COL4A2P08572 1712 aa9.79□□□□□ -0.84
BRCA1-207ENST00000461798 A0A1W2PQ27 194 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 A0A1W2PQ64 194 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 A0A1W2PQD8 194 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 C4BPAP04003 597 aaKnown RBP9.78□□□□□ -0.84
BRCA1-207ENST00000461798 PDGFRBP09619 1106 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 TCF3P15923 654 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 HOXA6P31267 233 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 CXCL12P48061 93 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 SOX9P48436 509 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 NRLP54845 237 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-207ENST00000461798 MYL6P60660 151 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 FAM160A1Q05DH4 1040 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 TRPC3Q13507 836 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 CCINQ13939 588 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 PPP2R5DQ14738 602 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 WDR72Q3MJ13 1102 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 WDR44Q5JSH3 913 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 TXNDC11Q6PKC3 985 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 SCN4BQ8IWT1 228 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 KIAA1958Q8N8K9 716 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 RUBCNQ92622 972 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 MYLPFQ96A32 169 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 SYAP1Q96A49 352 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-207ENST00000461798 PCED1BQ96HM7 432 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 MMS19Q96T76 1030 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 TTLL2Q9BWV7 592 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 SCAND2PQ9GZW5 306 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-207ENST00000461798 EPC1Q9H2F5 836 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 SNX25Q9H3E2 840 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 HPS4Q9NQG7 708 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 EXOC1Q9NV70 894 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 EHD2Q9NZN4 543 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 MAGED2Q9UNF1 606 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-207ENST00000461798 TRAF3IP3Q9Y228 551 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 CCL26Q9Y258 94 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 ATP6V1DQ9Y5K8 247 aa9.78□□□□□ -0.84
BRCA1-207ENST00000461798 LRRIQ3A6PVS8 624 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-207ENST00000461798 TRDMT1O14717 391 aaKnown RBP9.77□□□□□ -0.85
BRCA1-207ENST00000461798 IKBKBO14920 756 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 MAPK13O15264 365 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 HRO43593 1189 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 RHOBTB3O94955 611 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 RPN1P04843 607 aaKnown RBP9.77□□□□□ -0.85
BRCA1-207ENST00000461798 USP17L7P0C7H9 530 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 PTPN1P18031 435 aaKnown RBP9.77□□□□□ -0.85
BRCA1-207ENST00000461798 BDNFP23560 247 aa9.77□□□□□ -0.85
BRCA1-207ENST00000461798 GRIK1P39086 918 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms