RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 KLHL17Q6TDP4 642 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 Q6ZRM9 215 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 KCTD20Q7Z5Y7 419 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 TTC30AQ86WT1 665 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 KRT73Q86Y46 540 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 ZNF280BQ86YH2 543 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 MAPKAPK5Q8IW41 473 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 CCDC117Q8IWD4 279 aaPredicted RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 SLC15A3Q8IY34 581 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 GALNT15Q8N3T1 639 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 ZNF808Q8N4W9 903 aaPredicted RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 PPP2R3CQ969Q6 453 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 SORBS1Q9BX66 1292 aaKnown RBP3.7□□□□□ -1.82
VCL-203ENST00000461383 ZCWPW1Q9H0M4 648 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 SMOC2Q9H3U7 446 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 FAM83DQ9H4H8 585 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 RRN3Q9NYV6 651 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 TMOD4Q9NZQ9 345 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 ANAPC4Q9UJX5 808 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 HPSEQ9Y251 543 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 NOX1Q9Y5S8 564 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 CDY1Q9Y6F8 540 aa3.7□□□□□ -1.82
VCL-203ENST00000461383 hCG_1984214I3L0E3 225 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 M0R3H8 397 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 FCHO1O14526 889 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 GPR42O15529 346 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ASNA1O43681 348 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 TRIAP1O43715 76 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 SNX2O60749 519 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 USP1O94782 785 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 SUN1O94901 812 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ITGA2BP08514 1039 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 EGR1P18146 543 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 CD53P19397 219 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 CD6P30203 668 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 NDUFV1P49821 464 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 MTHFSP49914 203 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ANXA11P50995 505 aaKnown RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 ZNF134P52741 427 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 POLE2P56282 527 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ARL4CP56559 192 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 MC2RQ01718 297 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 OCA2Q04671 838 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 NSUN2Q08J23 767 aaKnown RBP eCLIP3.69□□□□□ -1.82
VCL-203ENST00000461383 FSTL1Q12841 308 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 GPS1Q13098 491 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 MAPKAPK3Q16644 382 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ADCK5Q3MIX3 580 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 PDCD4Q53EL6 469 aaKnown RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 FCRL6Q6DN72 434 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 SFRP4Q6FHJ7 346 aaPredicted RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 SULT6B1Q6IMI4 303 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 RGS7BPQ6MZT1 257 aaPredicted RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 MMS22LQ6ZRQ5 1243 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 GDF7Q7Z4P5 450 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 GGNQ86UU5 652 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 CCDC28AQ8IWP9 274 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 DNAJB14Q8TBM8 379 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 POC1BQ8TC44 478 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 CPT1CQ8TCG5 803 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 SNX19Q92543 992 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 TMEM125Q96AQ2 219 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 RNF31Q96EP0 1072 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ZNF668Q96K58 619 aaPredicted RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 NEU1Q99519 415 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 PTDSS2Q9BVG9 487 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 SLC46A2Q9BY10 475 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 SLC25A32Q9H2D1 315 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ZBTB26Q9HCK0 441 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 ITM2CQ9NQX7 267 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 C9orf78Q9NZ63 289 aaPredicted RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 IGSF9Q9P2J2 1179 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 HSFX1Q9UBD0 423 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 DKK4Q9UBT3 224 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 RGS17Q9UGC6 210 aaPredicted RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 LZTS1Q9Y250 596 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 MRPS17Q9Y2R5 130 aaKnown RBP3.69□□□□□ -1.82
VCL-203ENST00000461383 GPR52Q9Y2T5 361 aa3.69□□□□□ -1.82
VCL-203ENST00000461383 A0A087WZ62 844 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 PRAMEF33A0A0G2JMD5 474 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 MYADML2A6NDP7 307 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 HMX3A6NHT5 357 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 E7ENX8 843 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 TRIM24O15164 1050 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ZNF185O15231 689 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 KCNQ3O43525 872 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 PRAMEF10O60809 474 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ZNF623O75123 536 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 GLP2RO95838 553 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 VIPP01282 170 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ITGA5P08648 1049 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 PECAM1P16284 738 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 NPPBP16860 134 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 KCNA3P22001 575 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 NPTX2P47972 431 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 TOB1P50616 345 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 SCNN1GP51170 649 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 DGKEP52429 567 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ALDH18A1P54886 795 aaKnown RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 RPS7P62081 194 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms