RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 MTMR6Q9Y217 621 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 SPO11Q9Y5K1 396 aa8.96□□□□□ -0.98
ECHDC1-212ENST00000461239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 H0YGN5 161 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 NRDCO43847 1150 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 FBXO21O94952 628 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 STBD1O95210 358 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 SUPT20HL2P0C7V6 817 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 GCFC2P16383 781 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 SYN1P17600 705 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 SESN3P58005 492 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 ADAM17P78536 824 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 PKP1Q13835 747 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 KIR3DS1Q14943 382 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 SAFBQ15424 915 aaKnown RBP eCLIP8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 ZNF174Q15697 407 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 UGCGQ16739 394 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 LRCH2Q5VUJ6 765 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 NFRKBQ6P4R8 1299 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 UHMK1Q8TAS1 419 aaKnown RBP8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 SDF4Q9BRK5 362 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 TBX21Q9UL17 535 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 ZMYND8Q9ULU4 1186 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 SPEF1Q9Y4P9 236 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 PCDHB6Q9Y5E3 794 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 UMODL1Q5DID0 1318 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 EMSYQ7Z589 1322 aa8.95□□□□□ -0.98
ECHDC1-212ENST00000461239 TBX3O15119 743 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 SCGB1D2O95969 90 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 CLTBP09497 229 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 SMIM10L2AP0DMW4 78 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 SMIM10L2BP0DMW5 78 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 MARK3P27448 753 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 MCM7P33993 719 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 FAPQ12884 760 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 RESTQ13127 1097 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 PIN1Q13526 163 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 PLCB4Q15147 1175 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 PPP2R5AQ15172 486 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 IL17AQ16552 155 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 TRIM71Q2Q1W2 868 aaKnown RBP8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 FIGNQ5HY92 759 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 EMC4Q5J8M3 183 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 TTC38Q5R3I4 469 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 MARCH8Q5T0T0 291 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 MCTP1Q6DN14 999 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 SWSAP1Q6NVH7 229 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 FAM173BQ6P4H8 233 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 GALNT18Q6P9A2 607 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 PLPPR4Q7Z2D5 763 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 KIAA1958Q8N8K9 716 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 PDZD8Q8NEN9 1154 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 AFAP1L1Q8TED9 768 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 ZBTB10Q96DT7 871 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 SCYL1Q96KG9 808 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 FAM20AQ96MK3 541 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 TEKT3Q9BXF9 490 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 SP110Q9HB58 689 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 WRAP73Q9P2S5 460 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 KIF3AQ9Y496 699 aa8.94□□□□□ -0.98
ECHDC1-212ENST00000461239 H3BQV1 296 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 KIAA0355O15063 1070 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 CHMP2AO43633 222 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 NEMFO60524 1076 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 MED26O95402 600 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 CYP2C9P11712 490 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 SLC9A1P19634 815 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 TACR1P25103 407 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 TRAPPC10P48553 1259 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 STAT5BP51692 787 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 CHRNEQ04844 493 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 PPP2R5CQ13362 524 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 GPNMBQ14956 572 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 TERF2Q15554 542 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 BROXQ5VW32 411 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 ZBTB46Q86UZ6 589 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 SMAP1Q8IYB5 467 aaPredicted RBP8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 USP33Q8TEY7 942 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 C8orf48Q96LL4 319 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 ELF4Q99607 663 aaPredicted RBP8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 NAP1L4Q99733 375 aaKnown RBP8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 KATNAL1Q9BW62 490 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 SEZ6LQ9BYH1 1024 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 CD244Q9BZW8 370 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 CDH19Q9H159 772 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 PRO3102Q9H379 93 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 SMARCAD1Q9H4L7 1026 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 PRDM7Q9NQW5 492 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 SETD4Q9NVD3 440 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 ZIM2Q9NZV7 527 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 CCDC39Q9UFE4 941 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 DSEQ9UL01 958 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 ZDHHC9Q9Y397 364 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 PCDHA10Q9Y5I2 948 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 IGSF9BQ9UPX0 1349 aa8.93□□□□□ -0.98
ECHDC1-212ENST00000461239 SZT2Q5T011 3432 aa8.92□□□□□ -0.98
ECHDC1-212ENST00000461239 MROH7Q68CQ1 1323 aa8.92□□□□□ -0.98
ECHDC1-212ENST00000461239 MBLAC1A4D2B0 266 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-212ENST00000461239 VPS37CA5D8V6 355 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-212ENST00000461239 TMEM150BA6NC51 233 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms