RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 HSFX1Q9UBD0 423 aa15.29■□□□□ 0.04
COL5A3-202ENST00000461214 BZW2Q9Y6E2 419 aaKnown RBP15.29■□□□□ 0.04
COL5A3-202ENST00000461214 MYO7AQ13402 2215 aa15.29■□□□□ 0.04
COL5A3-202ENST00000461214 WDR27A2RRH5 827 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 TEX28O15482 410 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 CYP26A1O43174 497 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 CXCL14O95715 111 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 CNPP09543 421 aaKnown RBP15.28■□□□□ 0.04
COL5A3-202ENST00000461214 PDGFRBP09619 1106 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 CYP11B1P15538 503 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 OR1D2P34982 312 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 CA8P35219 290 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 ZXDAP98168 799 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 COL19A1Q14993 1142 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 SLC39A12Q504Y0 691 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 MDH1BQ5I0G3 518 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 OR8K1Q8NGG5 319 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 CPLX3Q8WVH0 158 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 AUTS2Q8WXX7 1259 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 MYLPFQ96A32 169 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 PCED1BQ96HM7 432 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 PDLIM2Q96JY6 352 aa15.28■□□□□ 0.04
COL5A3-202ENST00000461214 CDCA3Q99618 268 aaPredicted RBP15.28■□□□□ 0.04
COL5A3-202ENST00000461214 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL5A3-202ENST00000461214 KMT2EQ8IZD2 1858 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 MTMR11A4FU01 709 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 RNF225M0QZC1 329 aaPredicted RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 O00370 1275 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 THAP12O43422 761 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 ABLIM3O94929 683 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 CD19P15391 556 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 RPL17P18621 184 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 GTF2F1P35269 517 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 HYAL1Q12794 435 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 ORC1Q13415 861 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 SMAD4Q13485 552 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 TSR1Q2NL82 804 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 RSPO2Q6UXX9 243 aaPredicted RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 ERMP1Q7Z2K6 904 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 FAM35AQ86V20 835 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 SLC47A2Q86VL8 602 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 TC2NQ8N9U0 490 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 MICAL1Q8TDZ2 1067 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 HEXIM2Q96MH2 286 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 KLHL5Q96PQ7 755 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 PANX2Q96RD6 677 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 TMEM209Q96SK2 561 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 HNRNPABQ99729 332 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 FAM49BQ9NUQ9 324 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 AFF4Q9UHB7 1163 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 CD207Q9UJ71 328 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 NOCTQ9UK39 431 aaKnown RBP15.27■□□□□ 0.04
COL5A3-202ENST00000461214 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 PCDHB5Q9Y5E4 795 aa15.27■□□□□ 0.04
COL5A3-202ENST00000461214 ZFHX2Q9C0A1 2572 aaPredicted RBP15.26■□□□□ 0.03
COL5A3-202ENST00000461214 MYBPHLA2RUH7 354 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 HIDE1A8MVS5 230 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 LINC01565O15544 149 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 NCK2O43639 380 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 ATP2C2O75185 946 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 TBX10O75333 385 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 GLUD1P00367 558 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 SERPING1P05155 500 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 OR4Q2P0C623 313 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 ATF2P15336 505 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 BRD2P25440 801 aaKnown RBP15.26■□□□□ 0.03
COL5A3-202ENST00000461214 ANXA13P27216 316 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 AVPR2P30518 371 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 MAGEA11P43364 429 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 ID4P47928 161 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 BCAT1P54687 386 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 CDK17Q00537 523 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 CYP27A1Q02318 531 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
COL5A3-202ENST00000461214 ELMSAN1Q6PJG2 1045 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 LCLAT1Q6UWP7 414 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 VSTM1Q6UX27 236 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 RTL10Q7L3V2 364 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 IRF2BP2Q7Z5L9 587 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 LRRTM3Q86VH5 581 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 SPATA2LQ8IUW3 424 aaPredicted RBP15.26■□□□□ 0.03
COL5A3-202ENST00000461214 FUKQ8N0W3 1084 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 SPC24Q8NBT2 197 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 CYFIP2Q96F07 1278 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 CEP295NLQ96MC4 621 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 IRF2BPLQ9H1B7 796 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 HESX1Q9UBX0 185 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 DPP7Q9UHL4 492 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 FBXW11Q9UKB1 542 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 GTF3C4Q9UKN8 822 aa15.26■□□□□ 0.03
COL5A3-202ENST00000461214 ADAM12O43184 909 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 LSM8O95777 96 aaKnown RBP15.25■□□□□ 0.03
COL5A3-202ENST00000461214 SETSIPP0DME0 302 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 CCDC130P13994 396 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 FECHP22830 423 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 CLCN4P51793 760 aa15.25■□□□□ 0.03
COL5A3-202ENST00000461214 ADKP55263 362 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms