RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 CYP27A1Q02318 531 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 ARID5AQ03989 594 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 ARID5BQ14865 1188 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 CNGA2Q16280 664 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 SLC39A12Q504Y0 691 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 MDH1BQ5I0G3 518 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 ARHGAP17Q68EM7 881 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 FAM171BQ6P995 826 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 VSTM1Q6UX27 236 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 RTL10Q7L3V2 364 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 MSANTD4Q8NCY6 345 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 CCDC112Q8NEF3 446 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 OR10T2Q8NGX3 314 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 ZNF461Q8TAF7 563 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 WHAMMQ8TF30 809 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 GDPD5Q8WTR4 605 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 ZNF606Q8WXB4 792 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 CYFIP2Q96F07 1278 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 SMARCD1Q96GM5 515 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 NOX5Q96PH1 765 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 KLHL5Q96PQ7 755 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 TWNKQ96RR1 684 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 HNRNPABQ99729 332 aaKnown RBP8.05□□□□□ -1.12
ABCA4-202ENST00000460514 RTP3Q9BQQ7 232 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 DEF6Q9H4E7 631 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 HSFX1Q9UBD0 423 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 HMGXB4Q9UGU5 601 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 AFF4Q9UHB7 1163 aaKnown RBP8.05□□□□□ -1.12
ABCA4-202ENST00000460514 GTF3C4Q9UKN8 822 aa8.05□□□□□ -1.12
ABCA4-202ENST00000460514 SSU72P8A0A1W2PR75 194 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 MYBPHLA2RUH7 354 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TRIM66O15016 1216 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TEX28O15482 410 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 ATP2C2O75185 946 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 IPO7O95373 1038 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 LSM8O95777 96 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 GLUD1P00367 558 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CNPP09543 421 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 FAM200BP0CF97 657 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 PNMA6AP0CW24 399 aaPredicted RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 SETSIPP0DME0 302 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 ATF2P15336 505 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TNFAIP3P21580 790 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 BRD2P25440 801 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 DNAJB1P25685 340 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CLCN1P35523 988 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 MAGEA11P43364 429 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 BCAT1P54687 386 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 RPL10AP62906 217 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CDR2Q01850 454 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 PLD1Q13393 1074 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 ORC1Q13415 861 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CFAP221Q4G0U5 840 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 PPP1R26Q5T8A7 1209 aaPredicted RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 LIN9Q5TKA1 542 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 LCLAT1Q6UWP7 414 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CYP26C1Q6V0L0 522 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CCDC149Q6ZUS6 474 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 IRF2BP2Q7Z5L9 587 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 SPRED2Q7Z698 418 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 SLC47A2Q86VL8 602 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TMTC1Q8IUR5 882 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TC2NQ8N9U0 490 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 ANKRD52Q8NB46 1076 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 SLC2A14Q8TDB8 520 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 EPS8L1Q8TE68 723 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 HDAC7Q8WUI4 952 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 AUTS2Q8WXX7 1259 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 MYLPFQ96A32 169 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 PCED1BQ96HM7 432 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CEP295NLQ96MC4 621 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CLSTN3Q9BQT9 956 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 ZNF518BQ9C0D4 1074 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 MIS12Q9H081 205 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 DPEP3Q9H4B8 488 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 NSUN3Q9H649 340 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TLE6Q9H808 572 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 LUC7LQ9NQ29 371 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 CRTAC1Q9NQ79 661 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 FAM49BQ9NUQ9 324 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 SEPT11Q9NVA2 429 aaKnown RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 ABI2Q9NYB9 513 aaPredicted RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 EHD2Q9NZN4 543 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TSPAN16Q9UKR8 245 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 PCDHGC3Q9UN70 934 aa8.04□□□□□ -1.12
ABCA4-202ENST00000460514 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TNRC18O15417 2968 aaPredicted RBP8.04□□□□□ -1.12
ABCA4-202ENST00000460514 TRIOBPQ9H2D6 2365 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 WDR27A2RRH5 827 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 MTMR11A4FU01 709 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 HIDE1A8MVS5 230 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 M0QYV0 167 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 O00370 1275 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 PRRG1O14668 218 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 HCRTO43612 131 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 NCK2O43639 380 aa8.03□□□□□ -1.12
ABCA4-202ENST00000460514 AP1G2O75843 785 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms