RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 GLUD1P00367 558 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 CFHP08603 1231 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 CHRNB2P17787 502 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 FECHP22830 423 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 GRIK1P39086 918 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 GFPT1Q06210 699 aaPredicted RBP11.32□□□□□ -0.6
CDHR4-203ENST00000460430 ADCY1Q08828 1119 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 RAB33AQ14088 237 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 CLEC16AQ2KHT3 1053 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 CFAP221Q4G0U5 840 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 NAA35Q5VZE5 725 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 PPP1R2P3Q6NXS1 205 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 TTC30AQ86WT1 665 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 PALB2Q86YC2 1186 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 TMEM139Q8IV31 216 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 SCN4BQ8IWT1 228 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 ANKRD52Q8NB46 1076 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 ATAD1Q8NBU5 361 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 ZNF461Q8TAF7 563 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 KLHL5Q96PQ7 755 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 SYT11Q9BT88 431 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 LHX5Q9H2C1 402 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 CYP4F11Q9HBI6 524 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 LUC7LQ9NQ29 371 aaKnown RBP11.32□□□□□ -0.6
CDHR4-203ENST00000460430 ST7Q9NRC1 585 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
CDHR4-203ENST00000460430 AFF4Q9UHB7 1163 aaKnown RBP11.32□□□□□ -0.6
CDHR4-203ENST00000460430 CHD7Q9P2D1 2997 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 LAMA3Q16787 3333 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 RFXAPO00287 272 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 DDX3XO00571 662 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDHR4-203ENST00000460430 TGM5O43548 720 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 LILRB3O75022 631 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 ATF2P15336 505 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 CYP2F1P24903 491 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 MAGEA11P43364 429 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 MAP3K7CLP57077 242 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 NOMO3P69849 1222 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 CCZ1BP86790 482 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 CCZ1P86791 482 aaPredicted RBP11.31□□□□□ -0.6
CDHR4-203ENST00000460430 PDE4CQ08493 712 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 PDCLQ13371 301 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 CAMK1Q14012 370 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 SLC18A3Q16572 532 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 CCDC122Q5T0U0 273 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 ELMSAN1Q6PJG2 1045 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 VSTM1Q6UX27 236 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 CLEC20AQ6ZU45 233 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 CPA5Q8WXQ8 436 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 MRPL38Q96DV4 380 aaKnown RBP11.31□□□□□ -0.6
CDHR4-203ENST00000460430 ZNF830Q96NB3 372 aaPredicted RBP11.31□□□□□ -0.6
CDHR4-203ENST00000460430 PCDHB18PQ96TA0 734 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 DUSP16Q9BY84 665 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 TLE6Q9H808 572 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
CDHR4-203ENST00000460430 A0A087X0T9 212 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 F8VP50 259 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 XPO1O14980 1071 aaKnown RBP11.3□□□□□ -0.6
CDHR4-203ENST00000460430 NDUFA10O95299 355 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
CDHR4-203ENST00000460430 FAM228BP0C875 321 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 PLA2G4AP47712 749 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 TUFMP49411 452 aaKnown RBP11.3□□□□□ -0.6
CDHR4-203ENST00000460430 RGS7P49802 495 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 SNX16P57768 344 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
CDHR4-203ENST00000460430 CENPCQ03188 943 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 DUSP4Q13115 394 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 PLD1Q13393 1074 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 MTF1Q14872 753 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 VEPH1Q14D04 833 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 RAD9BQ6WBX8 426 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 PAQR9Q6ZVX9 377 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 RBM23Q86U06 439 aaKnown RBP11.3□□□□□ -0.6
CDHR4-203ENST00000460430 SIX6OS1Q8N1H7 587 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 TTC9BQ8N6N2 239 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 SMOQ99835 787 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 MIS12Q9H081 205 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 KCNF1Q9H3M0 494 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 PRDM12Q9H4Q4 367 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 NSUN3Q9H649 340 aaKnown RBP11.3□□□□□ -0.6
CDHR4-203ENST00000460430 LRRC4Q9HBW1 653 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 YIPF1Q9Y548 306 aa11.3□□□□□ -0.6
CDHR4-203ENST00000460430 EPN1Q9Y6I3 576 aaPredicted RBP11.3□□□□□ -0.6
CDHR4-203ENST00000460430 EIF3CLB5ME19 914 aaKnown RBP11.29□□□□□ -0.6
CDHR4-203ENST00000460430 SOX1O00570 391 aaPredicted RBP11.29□□□□□ -0.6
CDHR4-203ENST00000460430 PER2O15055 1255 aa11.29□□□□□ -0.6
CDHR4-203ENST00000460430 CLASP2O75122 1294 aaKnown RBP11.29□□□□□ -0.6
CDHR4-203ENST00000460430 SOAT2O75908 522 aa11.29□□□□□ -0.6
CDHR4-203ENST00000460430 ABLIM3O94929 683 aa11.29□□□□□ -0.6
CDHR4-203ENST00000460430 LRG1P02750 347 aa11.29□□□□□ -0.6
CDHR4-203ENST00000460430 CALB1P05937 261 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms