RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 NEU2Q9Y3R4 380 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 HES2Q9Y543 173 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 LACTBL1A8MY62 500 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 DYNC1LI2O43237 492 aaPredicted RBP16.17■□□□□ 0.18
LMNB1-203ENST00000460265 MED7O43513 233 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 CENPCQ03188 943 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 ITIH4Q14624 930 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 TXNRD3NBQ6F5E7 133 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 FASTKD5Q7L8L6 764 aaKnown RBP16.17■□□□□ 0.18
LMNB1-203ENST00000460265 TFAP2BQ92481 460 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 FAM149B1Q96BN6 582 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 DLGAP2Q9P1A6 1054 aa16.17■□□□□ 0.18
LMNB1-203ENST00000460265 TMEM120BA0PK00 339 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 ATP5DP30049 168 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 DARS2Q6PI48 645 aaKnown RBP16.16■□□□□ 0.18
LMNB1-203ENST00000460265 ARMCX2Q7L311 632 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 RNF169Q8NCN4 708 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 HPDLQ96IR7 371 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 VCXQ9H320 206 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 SPON1Q9HCB6 807 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 GOLGA8RI6L899 631 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 ASS1P00966 412 aaKnown RBP16.16■□□□□ 0.18
LMNB1-203ENST00000460265 CREB1P16220 341 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 ALDH3A1P30838 453 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 MTHFD1LQ6UB35 978 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 ZPBP2Q6X784 338 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 C4orf33Q8N1A6 199 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.16■□□□□ 0.18
LMNB1-203ENST00000460265 ZDHHC18Q9NUE0 388 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 KLK14Q9P0G3 267 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 RBPJLQ9UBG7 517 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 KAT6AQ92794 2004 aa16.16■□□□□ 0.18
LMNB1-203ENST00000460265 TCP11X1B4DZS4 312 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 ACKR2O00590 384 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 FSCN2O14926 492 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 GRIN3BO60391 1043 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 PAEPP09466 180 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 RAD23BP54727 409 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 CDH6P55285 790 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 NCALDP61601 193 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 POU5F1Q01860 360 aaKnown RBP16.15■□□□□ 0.18
LMNB1-203ENST00000460265 JADE1Q6IE81 842 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 RCOR2Q8IZ40 523 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.15■□□□□ 0.18
LMNB1-203ENST00000460265 HESX1Q9UBX0 185 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 LMNB2Q03252 620 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 CROCCP2Q86T23 111 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 KLF6Q99612 283 aaPredicted RBP16.15■□□□□ 0.18
LMNB1-203ENST00000460265 AVENQ9NQS1 362 aaPredicted RBP16.15■□□□□ 0.18
LMNB1-203ENST00000460265 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 MSCO60682 206 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 PDGFRAP16234 1089 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 MAGEA4P43358 317 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 MON1BQ7L1V2 547 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 PYROXD1Q8WU10 500 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 ACAP3Q96P50 834 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 NIFKQ9BYG3 293 aaKnown RBP16.15■□□□□ 0.18
LMNB1-203ENST00000460265 CDT1Q9H211 546 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 SETD4Q9NVD3 440 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 PPP2R3BQ9Y5P8 575 aa16.15■□□□□ 0.18
LMNB1-203ENST00000460265 H0YGN5 161 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ASAP2O43150 1006 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 CREB3O43889 395 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 BANF1O75531 89 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 YWHAGP61981 247 aaKnown RBP eCLIP16.14■□□□□ 0.17
LMNB1-203ENST00000460265 KLC1Q07866 573 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ANO7Q6IWH7 933 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 PPP1R21Q6ZMI0 780 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 GPRC5AQ8NFJ5 357 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 TMEM134Q9H6X4 195 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 GPATCH2LQ9NWQ4 482 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 NFS1Q9Y697 457 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 H3BRB1 525 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 GPR25O00155 361 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ADORA2AP29274 412 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 EPHX2P34913 555 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 TMEM132DQ14C87 1099 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 DBN1Q16643 649 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 RNF220Q5VTB9 566 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 BBOF1Q8ND07 529 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 JOSD2Q8TAC2 188 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 OLIG1Q8TAK6 271 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ACTL9Q8TC94 416 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
LMNB1-203ENST00000460265 TUT1Q9H6E5 874 aaKnown RBP16.14■□□□□ 0.17
LMNB1-203ENST00000460265 LRRC19Q9H756 370 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ALG13Q9NP73 1137 aaKnown RBP16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ASB14A6NK59 587 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 H0Y3Z8 333 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 PRPSAP2O60256 369 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
LMNB1-203ENST00000460265 CA4P22748 312 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 TPP2P29144 1249 aaPredicted RBP16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ADORA2BP29275 332 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ICAM3P32942 547 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 SCNN1BP51168 640 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 AP3M2P53677 418 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
LMNB1-203ENST00000460265 TSNAXIP1Q2TAA8 658 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms