RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CPA5Q8WXQ8 436 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 ZNF653Q96CK0 615 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CYFIP2Q96F07 1278 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 PSMB7Q99436 277 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 OSBPL7Q9BZF2 842 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 GOLPH3Q9H4A6 298 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CYP3A43Q9HB55 503 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 CD248Q9HCU0 757 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 PHF24Q9UPV7 400 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 GMEB1Q9Y692 573 aa10.94□□□□□ -0.66
HERC4-207ENST00000460168 TBKBP1A7MCY6 615 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 ARVCFO00192 962 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 DNM1LO00429 736 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 ATMINO43313 823 aaPredicted RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 STAU1O95793 577 aaKnown RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 TFRCP02786 760 aaKnown RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 CKBP12277 381 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 UNGP13051 313 aaPredicted RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 ITGA4P13612 1032 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 KCNE1P15382 129 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 CD19P15391 556 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 ATF7P17544 494 aaPredicted RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 CCT8P50990 548 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 MTFR1Q15390 333 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 SPDYCQ5MJ68 293 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 C9orf57Q5W0N0 161 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 SYCE1Q8N0S2 351 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 USP38Q8NB14 1042 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 WHAMMQ8TF30 809 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 CENPTQ96BT3 561 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 ZFP42Q96MM3 310 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 RPS6KC1Q96S38 1066 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 RNF208Q9H0X6 261 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 SNX12Q9UMY4 172 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 TMED5Q9Y3A6 229 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 SNX9Q9Y5X1 595 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 PDCD11Q14690 1871 aaKnown RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 MEIS3P2A8K0S8 358 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 PPEF2O14830 753 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 NCK2O43639 380 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 CFHP08603 1231 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 HSPA6P17066 643 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 MLH1P40692 756 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 DNA2P51530 1060 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 CENPCQ03188 943 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 WHAMMP3Q1A5X7 153 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 TRIM71Q2Q1W2 868 aaKnown RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 XKR4Q5GH76 650 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 CEP112Q8N8E3 955 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 RNF169Q8NCN4 708 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 CAPZA3Q96KX2 299 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 SDCBP2Q9H190 292 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 NRDE2Q9H7Z3 1164 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 GOLGA2P5Q9HBQ8 144 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 ERVK-5Q9HDB9 667 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 PAK6Q9NQU5 681 aaPredicted RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 PAPOLBQ9NRJ5 636 aaKnown RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 CHORDC1Q9UHD1 332 aaPredicted RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 GTF3C4Q9UKN8 822 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 CORO1CQ9ULV4 474 aaPredicted RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 PACSIN2Q9UNF0 486 aaPredicted RBP10.93□□□□□ -0.66
HERC4-207ENST00000460168 HYOU1Q9Y4L1 999 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 SCN1AP35498 2009 aa10.93□□□□□ -0.66
HERC4-207ENST00000460168 PABPN1LA6NDY0 278 aaKnown RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 FAM25EA8MYX2 175 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 ANKRD65E5RJM6 399 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 ATP9BO43861 1147 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 KDM1AO60341 852 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 CILPO75339 1184 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 CYP1A1P04798 512 aaPredicted RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 IDO1P14902 403 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 EZRP15311 586 aaKnown RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 TCP1P17987 556 aaKnown RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 CXCR5P32302 372 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 NOMO3P69849 1222 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 ORC1Q13415 861 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 PTPROQ16827 1216 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 FAM26DQ5JW98 314 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 SMYD5Q6GMV2 418 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 PEX26Q7Z412 305 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 HS6ST3Q8IZP7 471 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 GALNT15Q8N3T1 639 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 LRRC57Q8N9N7 239 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 LPPQ93052 612 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 SCYL1Q96KG9 808 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 ZNF560Q96MR9 790 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 ADAM2Q99965 735 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 TLR10Q9BXR5 811 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 ACBD3Q9H3P7 528 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 WBP1LQ9NX94 342 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 TTLL3Q9Y4R7 772 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 SQORQ9Y6N5 450 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 PTGESO14684 152 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 LIN7AO14910 233 aaPredicted RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 ZNF185O15231 689 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 MED7O43513 233 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 BUB1BO60566 1050 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms