RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 DCAKDQ8WVC6 231 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 NRG4Q8WWG1 115 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 CLEC4DQ8WXI8 215 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 BSNDQ8WZ55 320 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 KIFC3Q9BVG8 833 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TRIM55Q9BYV6 548 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 VCXQ9H320 206 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 MANSC1Q9H8J5 431 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 KCNK13Q9HB14 408 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ARL8BQ9NVJ2 186 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.91□□□□□ -0.98
VPS50-208ENST00000458707 STX18Q9P2W9 335 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 ZBTB21Q9ULJ3 1066 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 POLIQ9UNA4 740 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 VPS9D1Q9Y2B5 631 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 USTQ9Y2C2 406 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 MTO1Q9Y2Z2 717 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 SNCAIPQ9Y6H5 919 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 EXTL3O43909 919 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 PSMG1O95456 288 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 HLA-DRAP01903 254 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 KRT1P04264 644 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 PYGLP06737 847 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 GSTA2P09210 222 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 SKIP12755 728 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TCF4P15884 667 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ATF7P17544 494 aaPredicted RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 MMP8P22894 467 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 GNA15P30679 374 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 CDKN2BP42772 138 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ETV4P43268 484 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 PAPOLAP51003 745 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 CDK16Q00536 496 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ROR2Q01974 943 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 SLC34A1Q06495 639 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 CUL2Q13617 745 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 RCN1Q15293 331 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 DLGAP5Q15398 846 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TBC1D10BQ4KMP7 808 aaPredicted RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 HP1BP3Q5SSJ5 553 aaPredicted RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 TDRD10Q5VZ19 366 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 PLA2G4FQ68DD2 849 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 CWF19L1Q69YN2 538 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 LRRC74BQ6ZQY2 392 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ANO5Q75V66 913 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 GET4Q7L5D6 327 aaPredicted RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 PPIL6Q8IXY8 311 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 GALNT15Q8N3T1 639 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 NIPA2Q8N8Q9 360 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 NAT8LQ8N9F0 302 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 RDM1Q8NG50 284 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TEKT4Q8WW24 435 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 KCNN1Q92952 543 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ZBTB10Q96DT7 871 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TRAPPC9Q96Q05 1148 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 PAFAH2Q99487 392 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 YIPF2Q9BWQ6 316 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 TSSK1BQ9BXA7 367 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 FRMD8P1Q9BZ68 369 aaPredicted RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 SYNCQ9H7C4 482 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 PAPOLBQ9NRJ5 636 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 DDX56Q9NY93 547 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 MAP3K20Q9NYL2 800 aaKnown RBP8.91□□□□□ -0.98
VPS50-208ENST00000458707 HEY2Q9UBP5 337 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 ZNF212Q9UDV6 495 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.91□□□□□ -0.98
VPS50-208ENST00000458707 EFR3BQ9Y2G0 817 aa8.91□□□□□ -0.98
VPS50-208ENST00000458707 A8MXQ7 604 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 WDR64B1ANS9 1081 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 PI4K2BG5E9Z4 385 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 KLF11O14901 512 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 HNRNPDLO14979 420 aaKnown RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 SMIM24O75264 130 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 TBX10O75333 385 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 FAM155BO75949 473 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 VNN1O95497 513 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 CCNE2O96020 404 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 DLDP09622 509 aaKnown RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 SSTR1P30872 391 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 GJC1P36383 396 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 CAP2P40123 477 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 NEK3P51956 506 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 RAP1GDS1P52306 607 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 ARFIP2P53365 341 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 ARL4CP56559 192 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 RPL7AP62424 266 aaKnown RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 NOP14P78316 857 aaKnown RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 KRT76Q01546 638 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 SLC18A2Q05940 514 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 AP1B1Q10567 949 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 CBLBQ13191 982 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 TFDP1Q14186 410 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 PRKD1Q15139 912 aaPredicted RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 CCDC6Q16204 474 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 PUS10Q3MIT2 529 aaKnown RBP8.9□□□□□ -0.98
VPS50-208ENST00000458707 KAZNQ674X7 775 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 CIAPIN1Q6FI81 312 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 SH2D5Q6ZV89 423 aa8.9□□□□□ -0.98
VPS50-208ENST00000458707 TAS1R3Q7RTX0 852 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms