RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 NME7Q9Y5B8 376 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 DPYSL4O14531 572 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 GJA1P17302 382 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 WEE1P30291 646 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 PPP3CCP48454 512 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 GPR15P49685 360 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 PFKPQ01813 784 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 FAM78AQ5JUQ0 283 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 SDHAF4Q5VUM1 108 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
CD28-203ENST00000458610 EHBP1Q8NDI1 1231 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 TATDN2Q93075 761 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 PBXIP1Q96AQ6 731 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 CNOT6LQ96LI5 555 aaKnown RBP17.16■□□□□ 0.34
CD28-203ENST00000458610 ZNF518BQ9C0D4 1074 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 TRPV4Q9HBA0 871 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 IL21Q9HBE4 155 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 CISHQ9NSE2 258 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 ANO10Q9NW15 660 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 COMMD8Q9NX08 183 aa17.16■□□□□ 0.34
CD28-203ENST00000458610 BDP1A6H8Y1 2624 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 F8VP50 259 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 RTN3O95197 1032 aaPredicted RBP17.15■□□□□ 0.34
CD28-203ENST00000458610 F11P03951 625 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
CD28-203ENST00000458610 PDE6CP51160 858 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 CUL2Q13617 745 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 CCDC142Q17RM4 750 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 FAM35AQ86V20 835 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 DEPDC1BQ8WUY9 529 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 CYFIP2Q96F07 1278 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 FAM81BQ96LP2 452 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 HEXIM2Q96MH2 286 aaKnown RBP17.15■□□□□ 0.34
CD28-203ENST00000458610 HNRNPABQ99729 332 aaKnown RBP17.15■□□□□ 0.34
CD28-203ENST00000458610 LRFN3Q9BTN0 628 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 DMAP1Q9NPF5 467 aaPredicted RBP17.15■□□□□ 0.34
CD28-203ENST00000458610 SLC2A4RGQ9NR83 387 aa17.15■□□□□ 0.34
CD28-203ENST00000458610 CLDN5O00501 218 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 LRRN2O75325 713 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 AP1G2O75843 785 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 PFKLP17858 780 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 AVPR1AP37288 418 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 TANGO2Q6ICL3 276 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 MON1AQ86VX9 555 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 YAF2Q8IY57 180 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 FUKQ8N0W3 1084 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 NUP93Q8N1F7 819 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 SLC2A14Q8TDB8 520 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 TMEM176AQ96HP8 235 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 ZSWIM3Q96MP5 696 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 SLITRK1Q96PX8 696 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 KXD1Q9BQD3 176 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 TRMT61BQ9BVS5 477 aaKnown RBP17.14■□□□□ 0.33
CD28-203ENST00000458610 MFSD1Q9H3U5 465 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 OBP2AQ9NY56 170 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 TRPM5Q9NZQ8 1165 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 KIAA1257Q9ULG3 409 aa17.14■□□□□ 0.33
CD28-203ENST00000458610 FAM86C2PA6NEL3 165 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 FAM200BP0CF97 657 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 PSMC3P17980 439 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 SLC8A3P57103 927 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 LRMPQ12912 555 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
CD28-203ENST00000458610 MFSD6LQ8IWD5 586 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 SUGP1Q8IWZ8 645 aaKnown RBP17.13■□□□□ 0.33
CD28-203ENST00000458610 CMTM8Q8IZV2 173 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 PDZD8Q8NEN9 1154 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 ENOX1Q8TC92 643 aaKnown RBP17.13■□□□□ 0.33
CD28-203ENST00000458610 JAKMIP2Q96AA8 810 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 SHDQ96IW2 340 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 MED15Q96RN5 788 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 RPP25Q9BUL9 199 aaKnown RBP17.13■□□□□ 0.33
CD28-203ENST00000458610 TTLL2Q9BWV7 592 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 FAM49BQ9NUQ9 324 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 THG1LQ9NWX6 298 aaKnown RBP17.13■□□□□ 0.33
CD28-203ENST00000458610 HMGXB4Q9UGU5 601 aa17.13■□□□□ 0.33
CD28-203ENST00000458610 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 CFHP08603 1231 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 CCDC130P13994 396 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 YWHAQP27348 245 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 ADORA2BP29275 332 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 GPC5P78333 572 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 CYP4F8P98187 520 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 GCNT1Q02742 428 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 ORC1Q13415 861 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 STX1AQ16623 288 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 MAN2A1Q16706 1144 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 ZNF394Q53GI3 561 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 GBP6Q6ZN66 633 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 PPM1KQ8N3J5 372 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 CELF5Q8N6W0 485 aaKnown RBP17.12■□□□□ 0.33
CD28-203ENST00000458610 C12orf29Q8N999 325 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 IRF7Q92985 503 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 ASIC4Q96FT7 647 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 SLC46A2Q9BY10 475 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 FBXO44Q9H4M3 255 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 BRD9Q9H8M2 597 aa17.12■□□□□ 0.33
CD28-203ENST00000458610 CSNK1G1Q9HCP0 422 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms