RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 DDR2Q16832 855 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 SCARA3Q6AZY7 606 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 CMTM8Q8IZV2 173 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 SPEM1Q8N4L4 309 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 SPATA18Q8TC71 538 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 CCDC127Q96BQ5 260 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 MMS19Q96T76 1030 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 SYT15Q9BQS2 421 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 SLC46A2Q9BY10 475 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 TRPC7Q9HCX4 862 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 ABCB6Q9NP58 842 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 GTSE1Q9NYZ3 720 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 UXTQ9UBK9 157 aaPredicted RBP16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 PCDHA7Q9UN72 937 aa16.87■□□□□ 0.29
CHCHD3-204ENST00000457942 LAMA1P25391 3075 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 HCRTO43612 131 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 DDX6P26196 483 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 CTHP32929 405 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 HOXD13P35453 343 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 PON2Q15165 354 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 CCDC142Q17RM4 750 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 SOWAHAQ2M3V2 549 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 RESP18Q5W5W9 173 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 C4orf50Q6ZRC1 276 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 EPM2AIP1Q7L775 607 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 RALGPS2Q86X27 583 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 XXYLT1Q8NBI6 393 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 CXorf38Q8TB03 319 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 ZNF507Q8TCN5 953 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 LRRC3BQ96PB8 259 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 SLC39A2Q9NP94 309 aa16.86■□□□□ 0.29
CHCHD3-204ENST00000457942 MYBPHLA2RUH7 354 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 HOXB3P14651 431 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 HMGA1P17096 107 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 MLLT6P55198 1093 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 DNM1Q05193 864 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 TNK2Q07912 1038 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 CUL4BQ13620 913 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 PKP1Q13835 747 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 TXNDC8Q6A555 127 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 CC2D1AQ6P1N0 951 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 TRAPPC11Q7Z392 1133 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 GRAMD1CQ8IYS0 662 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 SCFD1Q8WVM8 642 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 DDX1Q92499 740 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 MYLPFQ96A32 169 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 CGRRF1Q99675 332 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 KIF9Q9HAQ2 790 aa16.85■□□□□ 0.29
CHCHD3-204ENST00000457942 ASPMQ8IZT6 3477 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 TGFB1I1O43294 461 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 EXOC3O60645 756 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 F11P03951 625 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 ANXA13P27216 316 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 WEE1P30291 646 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 SNRPFP62306 86 aaKnown RBP16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 TNNC1P63316 161 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 CYP27A1Q02318 531 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 CYP24A1Q07973 514 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 TRPC3Q13507 836 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 ITPRIPL2Q3MIP1 535 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 TCEAL6Q6IPX3 200 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 PKN3Q6P5Z2 889 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 MAMSTRQ6ZN01 415 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 DPH6Q7L8W6 267 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 TMEM150AQ86TG1 271 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 TCEAL3Q969E4 200 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 FUBP3Q96I24 572 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 SNX25Q9H3E2 840 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 MAGEC2Q9UBF1 373 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 CDH9Q9ULB4 789 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 CCL26Q9Y258 94 aa16.84■□□□□ 0.29
CHCHD3-204ENST00000457942 C1QTNF9BB2RNN3 333 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 GABRDO14764 452 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 PHACTR2O75167 634 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 ATP2C2O75185 946 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 NOL4O94818 638 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 CKMP06732 381 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 C1QTNF9P0C862 333 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 CNR2P34972 360 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 GRIK1P39086 918 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 PSMD6Q15008 389 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 MAPRE1Q15691 268 aaKnown RBP16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 DGKKQ5KSL6 1271 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 STPG1Q5TH74 334 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 PSAPL1Q6NUJ1 521 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 KBTBD6Q86V97 674 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 MON1AQ86VX9 555 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 WDR5BQ86VZ2 330 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 FSIP1Q8NA03 581 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 OR6B3Q8NGW1 331 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 KBTBD7Q8WVZ9 684 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 USP13Q92995 863 aaPredicted RBP16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 PKMYT1Q99640 499 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 EBF3Q9H4W6 596 aa16.83■□□□□ 0.28
CHCHD3-204ENST00000457942 GKN1Q9NS71 199 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms