RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 MAP3K7CLP57077 242 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 USP46P62068 366 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 YWHAEP62258 255 aaKnown RBP14.92□□□□□ -0.02
TIMP1-205ENST00000456754 CFAP221Q4G0U5 840 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 E4F1Q66K89 784 aaPredicted RBP14.92□□□□□ -0.02
TIMP1-205ENST00000456754 GPRIN1Q7Z2K8 1008 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 GPR149Q86SP6 731 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 FAM71AQ8IYT1 594 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 ST13P5Q8NFI4 369 aaPredicted RBP14.92□□□□□ -0.02
TIMP1-205ENST00000456754 C2orf15Q8WU43 125 aaKnown RBP14.92□□□□□ -0.02
TIMP1-205ENST00000456754 HDAC7Q8WUI4 952 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 HNRNPABQ99729 332 aaKnown RBP14.92□□□□□ -0.02
TIMP1-205ENST00000456754 STK33Q9BYT3 514 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 TTYH3Q9C0H2 523 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 ADAM7Q9H2U9 754 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 ABCB6Q9NP58 842 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 ZDHHC7Q9NXF8 308 aa14.92□□□□□ -0.02
TIMP1-205ENST00000456754 OBSL1O75147 1896 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 MBTPS2O43462 519 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 MICAL2O94851 1124 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 C1RP00736 705 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 SRGAP2BP0DMP2 458 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 IL9P15248 144 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 SP100P23497 879 aaPredicted RBP14.91□□□□□ -0.02
TIMP1-205ENST00000456754 CCR2P41597 374 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 GOLGA8FQ08AF8 430 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 GOLGA8DPQ0D2H9 430 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 PLD1Q13393 1074 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 MAPRE1Q15691 268 aaKnown RBP14.91□□□□□ -0.02
TIMP1-205ENST00000456754 SLC5A9Q2M3M2 681 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 UVSSAQ2YD98 709 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 SGO2Q562F6 1265 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 ARHGAP17Q68EM7 881 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 DENND1BQ6P3S1 775 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 CLEC20AQ6ZU45 233 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 ENOSF1Q7L5Y1 443 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
TIMP1-205ENST00000456754 BAP1Q92560 729 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 TCEAL4Q96EI5 215 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 FUBP3Q96I24 572 aaKnown RBP eCLIP14.91□□□□□ -0.02
TIMP1-205ENST00000456754 CORO1BQ9BR76 489 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 LRRC3Q9BY71 257 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 POMKQ9H5K3 350 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 TSPAN16Q9UKR8 245 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 MYO16Q9Y6X6 1858 aa14.91□□□□□ -0.02
TIMP1-205ENST00000456754 DOCK8Q8NF50 2099 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 FSD2A1L4K1 749 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 SLC38A8A6NNN8 435 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 HHLA1C9JL84 531 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 THAP12O43422 761 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 GABBR2O75899 941 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 PAPLNO95428 1278 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 PAEPP09466 180 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 HNRNPA1P09651 372 aaKnown RBP eCLIP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 VDRP11473 427 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 HMGA1P17096 107 aaKnown RBP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 HOXB8P17481 243 aaPredicted RBP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 GNA15P30679 374 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 MAGEA11P43364 429 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 ALDH1A3P47895 512 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 TUFMP49411 452 aaKnown RBP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 SMARCB1Q12824 385 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 IFRD2Q12894 506 aaPredicted RBP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 LEXMQ3ZCV2 418 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 DNAJB7Q7Z6W7 309 aaPredicted RBP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 TMC8Q8IU68 726 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 TTC39CQ8N584 583 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 SCAMP5Q8TAC9 235 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 ITFG1Q8TB96 612 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 SLC20A1Q8WUM9 679 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 CPLX3Q8WVH0 158 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 ING5Q8WYH8 240 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 SUSD6Q92537 303 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 SMARCD1Q96GM5 515 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 PIDD1Q9HB75 910 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 THEGQ9P2T0 379 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 MAGED2Q9UNF1 606 aaPredicted RBP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.9□□□□□ -0.02
TIMP1-205ENST00000456754 COG5Q9UP83 839 aa14.9□□□□□ -0.02
TIMP1-205ENST00000456754 PIK3R2O00459 728 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 MOSPD3O75425 235 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 RHOP08100 348 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 FAM200BP0CF97 657 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 MYL4P12829 197 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 TRIM21P19474 475 aaKnown RBP14.89□□□□□ -0.03
TIMP1-205ENST00000456754 HOXA9P31269 272 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 SOX5P35711 763 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 PGFP49763 221 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 EPHB3P54753 998 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 ARID5AQ03989 594 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 PDE4CQ08493 712 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 SMAD4Q13485 552 aaKnown RBP14.89□□□□□ -0.03
TIMP1-205ENST00000456754 PKDCCQ504Y2 493 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 TAF3Q5VWG9 929 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 PTCRAQ6ISU1 281 aaPredicted RBP14.89□□□□□ -0.03
TIMP1-205ENST00000456754 SARM1Q6SZW1 724 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 VSTM1Q6UX27 236 aa14.89□□□□□ -0.03
TIMP1-205ENST00000456754 NOP9Q86U38 636 aaKnown RBP14.89□□□□□ -0.03
TIMP1-205ENST00000456754 ZNF606Q8WXB4 792 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms