RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SNX3O60493 162 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 TTLL12Q14166 644 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 FASTKD3Q14CZ7 662 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 TDRPQ86YL5 185 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 ANKRD42Q8N9B4 389 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 ACTL9Q8TC94 416 aa19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 PRCCQ92733 491 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-209ENST00000456560 SGK1O00141 431 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 GPD2P43304 727 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 OTUD4Q01804 1114 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 PLCB3Q01970 1234 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 SMTNL2Q2TAL5 461 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 KCNT1Q5JUK3 1230 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 GJC2Q5T442 439 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 TAX1BP1Q86VP1 789 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 SRRM1Q8IYB3 904 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 TTC13Q8NBP0 860 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 CMASQ8NFW8 434 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 CPB2Q96IY4 423 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 SAE1Q9UBE0 346 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 MCM8Q9UJA3 840 aa19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 FARP1Q9Y4F1 1045 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-209ENST00000456560 CST8O60676 142 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 VDRP11473 427 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 MYO1EQ12965 1108 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 CEP57Q86XR8 500 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 NMRK2Q9NPI5 230 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 GH1P01241 217 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 HMGCRP04035 888 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 ARF4P18085 180 aaPredicted RBP19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 SCN4AP35499 1836 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 GJA5P36382 358 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 PSMC4P43686 418 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 ACAP1Q15027 740 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 KYAT1Q16773 422 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 ZNF792Q3KQV3 632 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 WLSQ5T9L3 541 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 ZC3H15Q8WU90 426 aaKnown RBP19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 HPDLQ96IR7 371 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 SYNCQ9H7C4 482 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 MLXIPLQ9NP71 852 aa19.29■□□□□ 0.68
SEMA3B-209ENST00000456560 EXOC1LA0A1B0GW35 172 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 RBM47A0AV96 593 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 TRUB2O95900 331 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 IFNB1P01574 187 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 CD48P09326 243 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 IBSPP21815 317 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 DYNLT1P63172 113 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 NR1H3Q13133 447 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 XRCC4Q13426 336 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 TMED2Q15363 201 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 PCGF5Q86SE9 256 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 TRABD2AQ86V40 505 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 PPP1R16BQ96T49 567 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 FGFR1OP2Q9NVK5 253 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 COL1A2P08123 1366 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 M0QYV0 167 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 DNAJC8O75937 253 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 P4HA1P13674 534 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 MIPP30301 263 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 GDF10P55107 478 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 INCA1Q0VD86 236 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 ARHGEF18Q6ZSZ5 1173 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 CENPUQ71F23 418 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 PNMA8AQ86V59 439 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 FAM228AQ86W67 206 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 PPTC7Q8NI37 304 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 C10orf88Q9H8K7 445 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 ZNF408Q9H9D4 720 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 PCSK1NQ9UHG2 260 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 AGAP1Q9UPQ3 857 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 AKT3Q9Y243 479 aa19.28■□□□□ 0.68
SEMA3B-209ENST00000456560 RASA4BC9J798 803 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 RASA4O43374 803 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 STAU1O95793 577 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 VTNP04004 478 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 SF3A3Q12874 501 aaKnown RBP eCLIP19.27■□□□□ 0.689e-7■□□□□ 10.7
SEMA3B-209ENST00000456560 TMEM132DQ14C87 1099 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 HP1BP3Q5SSJ5 553 aaPredicted RBP19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 GDAP1Q8TB36 358 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 MAGEB18Q96M61 343 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 HEXIM2Q96MH2 286 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 C16orf70Q9BSU1 422 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 PHACTR1Q9C0D0 580 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 VTA1Q9NP79 307 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 UBN1Q9NPG3 1134 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 NKIRAS1Q9NYS0 192 aa19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 BARX2Q9UMQ3 279 aaPredicted RBP19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 USP15Q9Y4E8 981 aaPredicted RBP19.27■□□□□ 0.68
SEMA3B-209ENST00000456560 GSTA1P08263 222 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 CYP3A5P20815 502 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 RPL22P35268 128 aaKnown RBP19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 PDIA2Q13087 525 aaKnown RBP19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 RASA2Q15283 850 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 TAF5Q15542 800 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 MTHFD1LQ6UB35 978 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 PPP1R21Q6ZMI0 780 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 TRPM8Q7Z2W7 1104 aa19.27■□□□□ 0.67
SEMA3B-209ENST00000456560 PPIL6Q8IXY8 311 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms