RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 LYSMD3Q7Z3D4 306 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 MYPNQ86TC9 1320 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 SNX31Q8N9S9 440 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 ZBTB8BQ8NAP8 495 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 SLCO2A1Q92959 643 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DGCR14Q96DF8 476 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 NGLY1Q96IV0 654 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CSF3RQ99062 836 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DCUN1D5Q9BTE7 237 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CDH19Q9H159 772 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 SOX17Q9H6I2 414 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 KIAA1551Q9HCM1 1747 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DUS2Q9NX74 493 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 HESX1Q9UBX0 185 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 BRWD1Q9NSI6 2320 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 MAGEB6P1A0A0J9YX57 407 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 FAM187AA6NFU0 413 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 GSTA2P09210 222 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 XRCC1P18887 633 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 MZF1P28698 734 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 IDUAP35475 653 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 PLCB3Q01970 1234 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CREB5Q02930 508 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DHX34Q14147 1143 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 R3HDM1Q15032 1099 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DLGAP5Q15398 846 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 KNOP1Q1ED39 458 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 PYCR3Q53H96 274 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 METTL21CQ5VZV1 264 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 ACAD11Q709F0 780 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 FAM186BQ8IYM0 893 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 LZTR1Q8N653 840 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 ACVR1CQ8NER5 493 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 KBTBD7Q8WVZ9 684 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 MXRA8Q9BRK3 442 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 RIOX1Q9H6W3 641 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 PRDM8Q9NQV8 689 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 ASIC3Q9UHC3 531 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 ZFP69BQ9UJL9 534 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 PCDHA12Q9UN75 941 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 MINPP1Q9UNW1 487 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 COMMD3-BMI1R4GMX3 469 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 GOLGA6L10A0A0M3HER8 536 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CREB3O43889 395 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 KCNH1O95259 989 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 SKIP12755 728 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CHRNA3P32297 505 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 SOX5P35711 763 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 NOVP48745 357 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 TNNI2P48788 182 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 POLD2P49005 469 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 FPGSQ05932 587 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 PDK3Q15120 406 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 OASLQ15646 514 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 EDRF1Q3B7T1 1238 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 EFHC2Q5JST6 749 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 TMEM198Q66K66 360 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 USP43Q70EL4 1123 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 KRT28Q7Z3Y7 464 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 REXO1Q8N1G1 1221 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNF398Q8TD17 642 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 HAUS1Q96CS2 278 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DHRS4Q9BTZ2 278 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 BRIP1Q9BX63 1249 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 TMEM120AQ9BXJ8 343 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 GBA3Q9H227 469 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 WDR70Q9NW82 654 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 TNS2Q63HR2 1409 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 FUOMA2VDF0 154 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 TBC1D12O60347 775 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CSDE1O75534 798 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 LUC7L3O95232 432 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 VIL1P09327 827 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 STAT1P42224 750 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CEACAM7Q14002 265 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 GRM4Q14833 912 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 C16orf46Q6P387 395 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 MFSD7Q6UXD7 560 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 ARMCX6Q7L4S7 300 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 RASSF3Q86WH2 238 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 LDHDQ86WU2 507 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 LMNTD2Q8IXW0 634 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 LRRC47Q8N1G4 583 aaKnown RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 NETO2Q8NC67 525 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DAGLBQ8NCG7 672 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 HMGCLL1Q8TB92 370 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 DCAKDQ8WVC6 231 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 MTBPQ96DY7 904 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 RNF41Q9H4P4 317 aaPredicted RBP4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 SMYD3Q9H7B4 428 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 CYP4F11Q9HBI6 524 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 RIC8AQ9NPQ8 531 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.76□□□□□ -1.653e-6■■■□□ 15.8
DEPDC1-202ENST00000456315 PCDHGA8Q9Y5G5 932 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
DEPDC1-202ENST00000456315 TANC1Q9C0D5 1861 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 SDK1Q7Z5N4 2213 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 E9PBE3 544 aa4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 TRMUO75648 421 aaKnown RBP4.75□□□□□ -1.65
DEPDC1-202ENST00000456315 RNASEH2AO75792 299 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms