RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 RTP1P59025 263 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 CDC16Q13042 620 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 DNAL1Q4LDG9 190 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 TFDP3Q5H9I0 405 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 TMCO4Q5TGY1 634 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 RASIP1Q5U651 963 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 SLC39A4Q6P5W5 647 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 KLF6Q99612 283 aaPredicted RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ALG13Q9NP73 1137 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ZDHHC7Q9NXF8 308 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ZNF646O15015 1829 aaPredicted RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 GOLGA8SH3BPF8 625 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 H3BRJ5 948 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 GOLGA8MH3BSY2 632 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ZCCHC18P0CG32 403 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 TCF4P15884 667 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ACO1P21399 889 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 YWHABP31946 246 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 CDK18Q07002 472 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 LRRC23Q53EV4 343 aaPredicted RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ANKRD22Q5VYY1 191 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ACAD11Q709F0 780 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 RBM15BQ8NDT2 890 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 STKLD1Q8NE28 680 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 FBXO36Q8NEA4 188 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 NDNQ99608 321 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 DDX50Q9BQ39 737 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 ARMCX1Q9P291 453 aa19.79■□□□□ 0.76
SEMA3B-208ENST00000456210 C2orf71A6NGG8 1288 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 CFHP08603 1231 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 CACNB3P54284 484 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 GAD2Q05329 585 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 LSAMPQ13449 338 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 KYAT3Q6YP21 454 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 MARK2Q7KZI7 788 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 NIPA1Q7RTP0 329 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 ALYREFQ86V81 257 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 RHPN2Q8IUC4 686 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 ULK2Q8IYT8 1036 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 POMGNT1Q8WZA1 660 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 OPTNQ96CV9 577 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 C7orf26Q96N11 449 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 FAM111AQ96PZ2 611 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 ZCWPW1Q9H0M4 648 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 SERPINA10Q9UK55 444 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 PPME1Q9Y570 386 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 IVNS1ABPQ9Y6Y0 642 aa19.78■□□□□ 0.76
SEMA3B-208ENST00000456210 FAM237BA0A1B0GVD1 139 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 TMEM191CA6NGB0 347 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 FKBP6O75344 327 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 FAM155BO75949 473 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 PENKP01210 267 aaPredicted RBP19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 ATP5BP06576 529 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 TMEM191BP0C7N4 346 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 CDKN2BP42772 138 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 CLDN10P78369 228 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 JAG1P78504 1218 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 ZNF252P-AS1Q0IIN9 211 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 TBCCQ15814 346 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 PABPC1LQ4VXU2 614 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 TREML1Q86YW5 311 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 GPD1LQ8N335 351 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 TTC17Q96AE7 1141 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 SERAC1Q96JX3 654 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 FRMD8P1Q9BZ68 369 aaPredicted RBP19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 UBE2OQ9C0C9 1292 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 C1orf21Q9H246 121 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 ZWILCHQ9H900 591 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 C17orf75Q9HAS0 396 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 ZNF277Q9NRM2 450 aaPredicted RBP19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 KCNH7Q9NS40 1196 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 IRAK4Q9NWZ3 460 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 TAGLN3Q9UI15 199 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 ZNRF3Q9ULT6 936 aa19.77■□□□□ 0.76
SEMA3B-208ENST00000456210 IRF6O14896 467 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 BUD23O43709 281 aaKnown RBP19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 GH2P01242 217 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 IFNB1P01574 187 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 NPTX2P47972 431 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 TBC1D10BQ4KMP7 808 aaPredicted RBP19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 AAGABQ6PD74 315 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 PASD1Q8IV76 773 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 ST13P4Q8IZP2 240 aaPredicted RBP19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.77■□□□□ 0.751e-12■□□□□ 9.5
SEMA3B-208ENST00000456210 CYTH2Q99418 400 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 DEFB129Q9H1M3 183 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 DDX56Q9NY93 547 aaKnown RBP19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 SLC7A8Q9UHI5 535 aa19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 ASTN2O75129 1339 aaPredicted RBP19.77■□□□□ 0.75
SEMA3B-208ENST00000456210 E5RJQ4 531 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 PABPC4LP0CB38 370 aaKnown RBP19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 CPA2P48052 419 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 PTK7Q13308 1070 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 WDR44Q5JSH3 913 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 ZFYVE27Q5T4F4 411 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 PALM2Q8IXS6 379 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 C4orf19Q8IY42 314 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 FBXO27Q8NI29 283 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 SLC44A1Q8WWI5 657 aa19.76■□□□□ 0.75
SEMA3B-208ENST00000456210 ZNF516Q92618 1163 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms