RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RASSF8Q8NHQ8 419 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 OLIG1Q8TAK6 271 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 SH3RF2Q8TEC5 729 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 SPATA17Q96L03 361 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 TMEM121BQ9BXQ6 578 aaPredicted RBP15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 ZHX3Q9H4I2 956 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 SLC32A1Q9H598 525 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 TRPC7Q9HCX4 862 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 L1RE1Q9UN81 338 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 WNT6Q9Y6F9 365 aa15.33■□□□□ 0.04
LYSMD3-202ENST00000453259 ATRXP46100 2492 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 H3BQV1 296 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 CDX4O14627 284 aaPredicted RBP15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 GABRDO14764 452 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 DCLK1O15075 740 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 PPP1R37O75864 691 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 HDCP19113 662 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 PLCG1P19174 1290 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 CYP2F1P24903 491 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 POLR2BP30876 1174 aaKnown RBP15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 DDIT3P35638 169 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 FOXC1Q12948 553 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 ALCAMQ13740 583 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 DDR2Q16832 855 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 LPCAT2Q7L5N7 544 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 RABEPKQ7Z6M1 372 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 WHAMMQ8TF30 809 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 NUSAP1Q9BXS6 441 aaKnown RBP15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 NEUROG3Q9Y4Z2 214 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 NUP205Q92621 2012 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 CACNA1GO43497 2377 aa15.32■□□□□ 0.04
LYSMD3-202ENST00000453259 MYO16Q9Y6X6 1858 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 MYMKA6NI61 221 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 H0Y626 953 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 K7EQS6 105 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 KIAA0391O15091 583 aaKnown RBP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 TRIM16O95361 564 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 ITGB3P05106 788 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 NEFLP07196 543 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 GAP43P17677 238 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 GARTP22102 1010 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 ADSSP30520 456 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 GPR15P49685 360 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 RBP5P82980 135 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 TFAMQ00059 246 aaKnown RBP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 MYO1EQ12965 1108 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 DHX8Q14562 1220 aaKnown RBP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 MCM6Q14566 821 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 PREPLQ4J6C6 727 aaPredicted RBP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 ANO7Q6IWH7 933 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 FAM171BQ6P995 826 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 DDX42Q86XP3 938 aaKnown RBP eCLIP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 SYT12Q8IV01 421 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 ADGRF2Q8IZF7 708 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 C1orf127Q8N9H9 656 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 MDGA1Q8NFP4 955 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 KCNV2Q8TDN2 545 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 GATA6Q92908 595 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 SLC22A12Q96S37 553 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 STRA6Q9BX79 667 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 POLMQ9NP87 494 aaPredicted RBP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 GTF3C4Q9UKN8 822 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 AGAP1Q9UPQ3 857 aa15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 R3HCC1Q9Y3T6 440 aaKnown RBP15.31■□□□□ 0.04
LYSMD3-202ENST00000453259 A0A0A0MRY4 1105 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 GIPC1O14908 333 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 ZZEF1O43149 2961 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 OPRD1P41143 372 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 P2RY2P41231 377 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 HELZP42694 1942 aaKnown RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 SLC7A9P82251 487 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 EOGTQ5NDL2 527 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 PEAR1Q5VY43 1037 aaPredicted RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 NAIF1Q69YI7 327 aaPredicted RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 LIMS2Q7Z4I7 341 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 BRAPQ7Z569 592 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 ARL14EPQ8N8R7 260 aaPredicted RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 ACCSQ96QU6 501 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 CYP2S1Q96SQ9 504 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 SCNM1Q9BWG6 230 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 TTLL2Q9BWV7 592 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 OLFML3Q9NRN5 406 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 POLR3BQ9NW08 1133 aaPredicted RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 RBAKQ9NYW8 714 aaPredicted RBP15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 TRPM5Q9NZQ8 1165 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 PCDHB13Q9Y5F0 798 aa15.3■□□□□ 0.04
LYSMD3-202ENST00000453259 BAHCC1Q9P281 2608 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 TISP43B9A030 160 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 TRIM66O15016 1216 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 OLFM2O95897 454 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 ADH1CP00326 375 aa15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 DHPSP49366 369 aaPredicted RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 NOP14P78316 857 aaKnown RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 HNRNPDQ14103 355 aaKnown RBP15.29■□□□□ 0.04
LYSMD3-202ENST00000453259 C2orf27AQ580R0 203 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms