RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 THADAQ6YHU6 1953 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 LNP1A1A4G5 178 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 C4orf47A7E2U8 309 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 K7EQS6 105 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
HERC3-207ENST00000452979 CKMP06732 381 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 PFKLP17858 780 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 HDCP19113 662 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 SYT1P21579 422 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 GARTP22102 1010 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 ACAT1P24752 427 aaKnown RBP12.51□□□□□ -0.41
HERC3-207ENST00000452979 MAGEA11P43364 429 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 LHX1P48742 406 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 TFAMQ00059 246 aaKnown RBP12.51□□□□□ -0.41
HERC3-207ENST00000452979 KCNA1Q09470 495 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
HERC3-207ENST00000452979 PMS2CLQ68D20 193 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 OSTM1Q86WC4 334 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 ZSWIM2Q8NEG5 633 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 RASSF8Q8NHQ8 419 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 USP33Q8TEY7 942 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 CEP295NLQ96MC4 621 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 LINC00597Q9H2U6 94 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 ITGA11Q9UKX5 1188 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 ARHGAP26Q9UNA1 814 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
HERC3-207ENST00000452979 ASPMQ8IZT6 3477 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 C2orf78A6NCI8 922 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 GAP43P17677 238 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 OPRD1P41143 372 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 PDE6CP51160 858 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 DGKEP52429 567 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 RBP5P82980 135 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 PSMD2Q13200 908 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 SF3A1Q15459 793 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 SOWAHAQ2M3V2 549 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 L1TD1Q5T7N2 865 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 DAB2IPQ5VWQ8 1189 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 LARP1BQ659C4 914 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 DYMQ7RTS9 669 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 BRAPQ7Z569 592 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 SPATA2LQ8IUW3 424 aaPredicted RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 CSGALNACT2Q8N6G5 542 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 ARL14EPQ8N8R7 260 aaPredicted RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 DNAJC19Q96DA6 116 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 SPATA17Q96L03 361 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 ACCSQ96QU6 501 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 TRPC7Q9HCX4 862 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 RBAKQ9NYW8 714 aaPredicted RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 SNX9Q9Y5X1 595 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 TNRC6BQ9UPQ9 1833 aaKnown RBP12.5□□□□□ -0.41
HERC3-207ENST00000452979 FRYQ5TBA9 3013 aa12.5□□□□□ -0.41
HERC3-207ENST00000452979 ABCA7Q8IZY2 2146 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 CDX4O14627 284 aaPredicted RBP12.49□□□□□ -0.41
HERC3-207ENST00000452979 GIPC1O14908 333 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 NFATC1O95644 943 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 CEACAM1P13688 526 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 PCSK1P29120 753 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 GBP1P32455 592 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 NOVA1P51513 510 aaKnown RBP12.49□□□□□ -0.41
HERC3-207ENST00000452979 MRPS21P82921 87 aaKnown RBP12.49□□□□□ -0.41
HERC3-207ENST00000452979 ZXDBP98169 803 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 GAB4Q2WGN9 574 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 VSTM1Q6UX27 236 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 ADGRF2Q8IZF7 708 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 ADGRG2Q8IZP9 1017 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 OLIG1Q8TAK6 271 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 SAAL1Q96ER3 474 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 EPSTI1Q96J88 318 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 TMEM9BQ9NQ34 198 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 OLFML3Q9NRN5 406 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 MAGEC2Q9UBF1 373 aaPredicted RBP12.49□□□□□ -0.41
HERC3-207ENST00000452979 STK17AQ9UEE5 414 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 MMP17Q9ULZ9 603 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 PCDHB13Q9Y5F0 798 aa12.49□□□□□ -0.41
HERC3-207ENST00000452979 WDFY3Q8IZQ1 3526 aa12.48□□□□□ -0.41
HERC3-207ENST00000452979 VPS37CA5D8V6 355 aaPredicted RBP12.48□□□□□ -0.41
HERC3-207ENST00000452979 MYMKA6NI61 221 aa12.48□□□□□ -0.41
HERC3-207ENST00000452979 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
HERC3-207ENST00000452979 HCRTO43612 131 aa12.48□□□□□ -0.41
HERC3-207ENST00000452979 STX6O43752 255 aa12.48□□□□□ -0.41
HERC3-207ENST00000452979 ATP2C2O75185 946 aa12.48□□□□□ -0.41
HERC3-207ENST00000452979 C1QTNF9P0C862 333 aa12.48□□□□□ -0.41
HERC3-207ENST00000452979 PDCP20941 246 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms