RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 A8MXQ7 604 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 RGS16O15492 202 aaPredicted RBP12.39□□□□□ -0.43
VTA1-203ENST00000452973 HMGCRP04035 888 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 MIPP30301 263 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 MDH1P40925 334 aaKnown RBP12.39□□□□□ -0.43
VTA1-203ENST00000452973 ARSEP51690 589 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 HOOK3Q86VS8 718 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 CCDC89Q8N998 374 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 SLCO2A1Q92959 643 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 C9orf72Q96LT7 481 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 B3GNT5Q9BYG0 378 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 CACNG4Q9UBN1 327 aa12.39□□□□□ -0.43
VTA1-203ENST00000452973 PDGFRAP16234 1089 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 ADORA2BP29275 332 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 CPT1AP50416 773 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 GPS1Q13098 491 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 ZNF268Q14587 947 aaPredicted RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 ZNF618Q5T7W0 954 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 PMF1Q6P1K2 205 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 FAM183BPQ6ZVS7 135 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 VRTNQ9H8Y1 702 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 MYADML2A6NDP7 307 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 FOXO6A8MYZ6 492 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 E7EVH7 732 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 GOLGA8MH3BSY2 632 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 CTSHP09668 335 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 PPP2R2AP63151 447 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 SLC25A11Q02978 314 aaKnown RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 APBB1IPQ7Z5R6 666 aaPredicted RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 RFX6Q8HWS3 928 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 RXFP2Q8WXD0 754 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 NGRNQ9NPE2 291 aaKnown RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 DDX56Q9NY93 547 aaKnown RBP12.38□□□□□ -0.43
VTA1-203ENST00000452973 WDR35Q9P2L0 1181 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 NME7Q9Y5B8 376 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 C17orf102A2RUQ5 167 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 RASGRF2O14827 1237 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 NUDT17P0C025 328 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 INCA1Q0VD86 236 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 SF3A3Q12874 501 aaKnown RBP eCLIP12.38□□□□□ -0.43
VTA1-203ENST00000452973 GNASQ5JWF2 1037 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 LRRC38Q5VT99 294 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 ACTL9Q8TC94 416 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 TBK1Q9UHD2 729 aa12.38□□□□□ -0.43
VTA1-203ENST00000452973 SMIM28A0A1B0GU29 152 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 MBLAC1A4D2B0 266 aaPredicted RBP12.37□□□□□ -0.43
VTA1-203ENST00000452973 MANSC4A6NHS7 340 aaPredicted RBP12.37□□□□□ -0.43
VTA1-203ENST00000452973 PGK1P00558 417 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 KRT7P08729 469 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 CCDC130P13994 396 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 LMO2P25791 158 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 RGS2P41220 211 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 OTUD4Q01804 1114 aaKnown RBP12.37□□□□□ -0.43
VTA1-203ENST00000452973 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 C9orf57Q5W0N0 161 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
VTA1-203ENST00000452973 TTC30AQ86WT1 665 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 NIPA2Q8N8Q9 360 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 MAP3K6O95382 1288 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 KDELR1P24390 212 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 NRLP54845 237 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 ADCY1Q08828 1119 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 SYCP2LQ5T4T6 812 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 TRNP1Q6NT89 227 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 LCLAT1Q6UWP7 414 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 CXCL17Q6UXB2 119 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 IFNL1Q8IU54 200 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 ZFP42Q96MM3 310 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 PLEKHA5Q9HAU0 1116 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.37□□□□□ -0.43
VTA1-203ENST00000452973 CTNNAL1Q9UBT7 734 aa12.37□□□□□ -0.43
VTA1-203ENST00000452973 SPTLC1O15269 473 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 PFKMP08237 780 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 CDH6P55285 790 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 CRHR2Q13324 411 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 FBXO47Q5MNV8 452 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 C17orf99Q6UX52 265 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 NT5DC4Q86YG4 428 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 MRRFQ96E11 262 aaKnown RBP12.36□□□□□ -0.43
VTA1-203ENST00000452973 MCRS1Q96EZ8 462 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 ASNSD1Q9NWL6 643 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 NEU2Q9Y3R4 380 aa12.36□□□□□ -0.43
VTA1-203ENST00000452973 RPS6KA5O75582 802 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms