RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 AKAP5P24588 427 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 RPA3P35244 121 aaPredicted RBP11.7□□□□□ -0.54
DDR1-239ENST00000452441 DRG2P55039 364 aaKnown RBP11.7□□□□□ -0.54
DDR1-239ENST00000452441 MAMLD1Q13495 774 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 TMEM63BQ5T3F8 832 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 CROCCP2Q86T23 111 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 ACOT1Q86TX2 421 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 SCUBE3Q8IX30 993 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
DDR1-239ENST00000452441 JOSD2Q8TAC2 188 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 NSMCE1Q8WV22 266 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 PORCNQ9H237 461 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 SUFUQ9UMX1 484 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 TIMM13Q9Y5L4 95 aaPredicted RBP11.7□□□□□ -0.54
DDR1-239ENST00000452441 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 PTPRJQ12913 1337 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 FAM47DPA6NHR8 397 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 P4HA2O15460 535 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 LPXNO60711 386 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 MUTP22033 750 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 EFNA5P52803 228 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 TAF1CQ15572 869 aaPredicted RBP11.7□□□□□ -0.54
DDR1-239ENST00000452441 TMEM192Q8IY95 271 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 RBM41Q96IZ5 413 aaKnown RBP11.7□□□□□ -0.54
DDR1-239ENST00000452441 AP5M1Q9H0R1 490 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 ZFP69BQ9UJL9 534 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 NOCTQ9UK39 431 aaKnown RBP11.7□□□□□ -0.54
DDR1-239ENST00000452441 PHTF1Q9UMS5 762 aa11.7□□□□□ -0.54
DDR1-239ENST00000452441 M0QZ92 97 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 OGTO15294 1046 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 USP2O75604 605 aaPredicted RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 GARTP22102 1010 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ADRA1DP25100 572 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 GBP1P32455 592 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 GCKP35557 465 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 EPHB1P54762 984 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 BCAR1P56945 870 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 SLC8A3P57103 927 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ITIH4Q14624 930 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 CFAP157Q5JU67 520 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 SPDYCQ5MJ68 293 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 SH3PXD2AQ5TCZ1 1133 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 DENND1BQ6P3S1 775 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 SLC39A4Q6P5W5 647 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 NIPA1Q7RTP0 329 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 PIGWQ7Z7B1 504 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 LONP2Q86WA8 852 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 GPC2Q8N158 579 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 C2orf69Q8N8R5 385 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 DNAAF3Q8N9W5 541 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 TTC1Q99614 292 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 APOL2Q9BQE5 337 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 LPIN3Q9BQK8 851 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 LOC100653049A0A140TA62 436 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 A0A1B0GUA9 196 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 A6NJR5 290 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 A8MXQ7 604 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 I3L4J1 428 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 MGRN1O60291 552 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 SNX3O60493 162 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 KRT34O76011 436 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ZNF157P51786 506 aaPredicted RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 RABGGTBP53611 331 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ARL4CP56559 192 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 MXD4Q14582 209 aaPredicted RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 IER5Q5VY09 327 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 XRRA1Q6P2D8 792 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ZCCHC23Q6ZST2 131 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ENOSF1Q7L5Y1 443 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 TRIM56Q9BRZ2 755 aaKnown RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 NIF3L1Q9GZT8 377 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 NCF2P19878 526 aaPredicted RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 PEX5P50542 639 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 RAD23BP54727 409 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 BEX3Q00994 111 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 C1orf220Q5T0J3 134 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 NXNQ6DKJ4 435 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 TRMT10CQ7L0Y3 403 aaKnown RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 FASTKD5Q7L8L6 764 aaKnown RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 MTDHQ86UE4 582 aaKnown RBP11.69□□□□□ -0.54
DDR1-239ENST00000452441 TEX2Q8IWB9 1127 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 LMO3Q8TAP4 145 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 SNX25Q9H3E2 840 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ERAP1Q9NZ08 941 aa11.69□□□□□ -0.54
DDR1-239ENST00000452441 ADCY3O60266 1144 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 FAM155BO75949 473 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 ALDH18A1P54886 795 aaKnown RBP11.68□□□□□ -0.54
DDR1-239ENST00000452441 ABHD15Q6UXT9 468 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 RDM1Q8NG50 284 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 RMDN2Q96LZ7 410 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 ACAP3Q96P50 834 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 YIPF3Q9GZM5 350 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 C17orf75Q9HAS0 396 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 PCMTD2Q9NV79 361 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 ARL2BPQ9Y2Y0 163 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 ATP8B3O60423 1300 aa11.68□□□□□ -0.54
DDR1-239ENST00000452441 MROH7Q68CQ1 1323 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms