RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TBC1D7Q9P0N9 293 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 GTF3C4Q9UKN8 822 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 R3HCC1Q9Y3T6 440 aaKnown RBP11.68□□□□□ -0.54
USP1-204ENST00000452143 PCDHGA5Q9Y5G8 931 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 GDF9O60383 454 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 EGFP01133 1207 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 KRT19P08727 400 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 ZNF806P0C7X5 589 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 ARSAP15289 507 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 TCF3P15923 654 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 PFKLP17858 780 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 ACAT1P24752 427 aaKnown RBP11.67□□□□□ -0.54
USP1-204ENST00000452143 GJA4P35212 333 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 MAGEA11P43364 429 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 RESTQ13127 1097 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 KCNB1Q14721 858 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 SURF1Q15526 300 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 AASDHQ4L235 1098 aaPredicted RBP11.67□□□□□ -0.54
USP1-204ENST00000452143 VSTM1Q6UX27 236 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 SYT13Q7L8C5 426 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 STKLD1Q8NE28 680 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 CCDC26Q8TAB7 109 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 CLIC6Q96NY7 704 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 ECT2Q9H8V3 914 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 PDE11AQ9HCR9 933 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 TRPC7Q9HCX4 862 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 DUS2Q9NX74 493 aaKnown RBP11.67□□□□□ -0.54
USP1-204ENST00000452143 EHD2Q9NZN4 543 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 SIX4Q9UIU6 781 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 ZFHX4Q86UP3 3567 aa11.67□□□□□ -0.54
USP1-204ENST00000452143 NUP205Q92621 2012 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 TNNC2P02585 160 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 IFNAR2P48551 515 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 SOWAHAQ2M3V2 549 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 PLA2G2CQ5R387 149 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 SDHAF4Q5VUM1 108 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 IL31Q6EBC2 164 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 FAM171BQ6P995 826 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 LIMS2Q7Z4I7 341 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 OSTM1Q86WC4 334 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 CCDC65Q8IXS2 484 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 KIAA1958Q8N8K9 716 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 ZSWIM2Q8NEG5 633 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 CD101Q93033 1021 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 SPATA17Q96L03 361 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 SYT15Q9BQS2 421 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 LRRC27Q9C0I9 530 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 ARRDC1-AS1Q9H2J1 176 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 TNMDQ9H2S6 317 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 INTS13Q9NVM9 706 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 CDH9Q9ULB4 789 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 ARHGAP26Q9UNA1 814 aa11.66□□□□□ -0.54
USP1-204ENST00000452143 GOLGA8IPA6NC78 632 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 GOLGA8JA6NMD2 632 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 AXIN1O15169 862 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 NFATC1O95644 943 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 APBB3O95704 486 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 SYT1P21579 422 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 HOXC13P31276 330 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 MPLP40238 635 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 PXNP49023 591 aaPredicted RBP11.65□□□□□ -0.54
USP1-204ENST00000452143 GALK1P51570 392 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 NR1H3Q13133 447 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 ELF2Q15723 593 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 DUOXA2Q1HG44 320 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 EML3Q32P44 896 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 KBTBD6Q86V97 674 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 WDR49Q8IV35 697 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 SCN4BQ8IWT1 228 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 RPLP0P6Q8NHW5 317 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 SH3RF2Q8TEC5 729 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 KBTBD7Q8WVZ9 684 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 MYLPFQ96A32 169 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 HHIPQ96QV1 700 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 SLC22A12Q96S37 553 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 FGFBP2Q9BYJ0 223 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 CUEDC2Q9H467 287 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 PCIF1Q9H4Z3 704 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 KIAA1586Q9HCI6 787 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 FBRSL1Q9HCM7 1045 aaKnown RBP11.65□□□□□ -0.54
USP1-204ENST00000452143 VPS45Q9NRW7 570 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 GCNT4Q9P109 453 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 EBF1Q9UH73 591 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 WNT6Q9Y6F9 365 aa11.65□□□□□ -0.54
USP1-204ENST00000452143 PTPRJQ12913 1337 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 A0A087X0B3 334 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 TULP1O00294 542 aaPredicted RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 TRIM66O15016 1216 aa11.64□□□□□ -0.55
USP1-204ENST00000452143 EIF3DO15371 548 aaKnown RBP eCLIP11.64□□□□□ -0.553e-12■■□□□ 13.3
USP1-204ENST00000452143 PRPF6O94906 941 aaKnown RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
USP1-204ENST00000452143 WARSP23381 471 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms